Echinops telfairi (small Madagascar hedgehog): 101656716
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Entry
101656716 CDS
T08707
Symbol
ARID2
Name
(RefSeq) AT-rich interactive domain-containing protein 2
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03082
ATP-dependent chromatin remodeling
etf05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101656716 (ARID2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101656716 (ARID2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
etf03000
]
101656716 (ARID2)
03021 Transcription machinery [BR:
etf03021
]
101656716 (ARID2)
03036 Chromosome and associated proteins [BR:
etf03036
]
101656716 (ARID2)
Transcription factors [BR:
etf03000
]
Eukaryotic type
Helix-turn-helix
ARID
101656716 (ARID2)
Transcription machinery [BR:
etf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101656716 (ARID2)
Chromosome and associated proteins [BR:
etf03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
101656716 (ARID2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFX_DNA_binding
FOXP-CC
TSTD2_N
Motif
Other DBs
NCBI-GeneID:
101656716
NCBI-ProteinID:
XP_004711495
LinkDB
All DBs
Position
Unknown
AA seq
1682 aa
AA seq
DB search
MDFNSPNDYNKLVLSLLSGLPNEVDFAINVCTLLSNESKHVMQLEKDPKIITLLLANAGV
FDDTLGSFSSVFGEEWKEKTDRDFVKFWKDIVDDNEVRDLISDRNKSHEGTSGEWIWESL
FHPPRKLGINDIEGQRVLQIAVILRNLSFEEGNVKLLAANRTCLRFLLLSAHSHFISLRQ
LGLDTLGNIAAELLLDPVDFKTTHLMFHTVTKCLMSRDRFLKMRGMEILGNLCKAEDNGV
LICEYVDQDSYREIICHLTLPDVLLVISTLEVLYMLTEMGDVACTKIAKVEKSIDMLVCL
VSMDIQMFGPDALAAVKLVEHPSSSHQVLSDIRPQAVEQVQTQTHVASVPASRAVVAQHV
GPPPGIVEIDSEKFACQWLNAHFEVNPDCSVSRAEMYSEYLSTCSKLARGGILTSTGFYK
CLRTVFPNHTVKRVEDPSNNGQAHIHVVGVKRRAIPLPIQMYYQQQPASTPVVRVDSVSE
VSPAPSPAGLPHGPQTVGNPFQRTPVTNQSSNLTATQMSFPVQGVHTVAQTVSRIPPSPS
VLTHQQQSAPVTVIQNKAPIPCEVVKATVIQNSIPPSAVPVSIAVGGGAAQGSVVQNHST
GPQPVTVVNSQTLLHHPPVIPQQSPLHTVVPGQIPSGTPVTVIQQAVPQSHIFGRVQNIP
ACTSTVSQGQQLITTSPQPVQTSSQQTSAGSQPQDTVIIAPPQYVTTSASNIVSATSVQN
FQVATGQMVTIAGVPSPQPSRVGFQNIAPKPVPSQQVPSTVVQQPIQQPQQPTQQSVVIV
SQPAQQGQTYAPAIHQIVLANPATLPAGQTVQLTGQPNITPSSSPSPIPATNNQVPTVMS
SSASTPQSQGPPPTVSQMLSVKRQQQQQQQQHSPAPPPQQVQVQVQQPQQTNTGISQPAS
GESSLIKQLLLPKRGPSTPGGKLILPAPQIPPPNNARAPSPQVVYQVANNQATGFGVQGQ
TPAQQLLVGQQNVQLVQSALPPTGGVQTMPISNLQILPGPLISNSPATIFQGTSGNQVTI
TVVPNTSFATATVSQGNATQLIAPAGITMSGTQAGVGLQVQPLPATQASPAGQSPCTTAT
PPFKGDKIICQKEEEAKEATGLHVHERKIEVMENPSCRRGAMNTSNGDTKENEMQVGSLL
NGRKYSDSSLPPSNSGKIQSEANQCSLISNGPWLELGENGASGKQNAEQMDMQDIKSDFK
KSLVNGICDFDKGDGSHLSKNIPNHKTSNHVGNGEISPVEPQGTLDATQQDTAKGDQLER
FSNGPILTWGGSPSACSIQEASSVATQQFSGTDLPNGPLASSLNSDVPQQRPSVVVSPHS
TTSVIQGHQVIAVPHSGSRVSQSPALSSEVRSTNGTADCRPVKRPAEDTDRETVTGIPNK
VGVRIVTISDPNNAGCSATMVAVPAGADPSTVAKVAIESAVQQKQPHPPTYVPNAPQNTP
MAPSAAVQVQGHQPSSSQPSPFSGCSQLGDPMRKPGQNFMCLWQSCKKWFQTPSQVFYHA
ATEHGGKDVYPGQCLWEGCEPFQRQRFSFITHLQDKHCSKDALLAGLKQDEPGQAGSQKS
STKQPTVGGTSSTPRAQKVIVNHPSAALMALRRGSRNLVFRDFTDEKEGPITKHIRLTAA
LILKNIGKYSECGRRLLKRHENNLSVLAISNMEASSTLAKCLYELNFTVQSKEQEKDSEM
LQ
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atggacttcaattcgccaaatgactataataaattggtgctttcactgttatctggactc
ccaaatgaagtggattttgctattaatgtatgcactctcctatcaaacgaaagcaagcac
gtcatgcaacttgaaaaagaccctaaaatcatcactttattacttgctaatgccggggtg
tttgatgacactttaggatccttttcttctgtatttggagaagaatggaaggagaagact
gatagagattttgttaagttttggaaagacattgttgatgataatgaagtacgtgacctc
atttccgatagaaataagtctcatgaaggtacatcaggagaatggatttgggaatcttta
tttcatccacctcgaaagctgggcattaacgatattgaaggacagcgggtacttcagatt
gctgtgattctgcgaaatctttcatttgaagagggcaatgttaagctcttggcagctaat
cgaacttgtcttcgtttcctattactttctgcacatagtcattttatttctctaagacag
ttgggccttgatacattaggaaatattgcagctgagcttttattggaccctgttgatttc
aaaactactcatctgatgttccatactgttacgaaatgcctgatgtcaagggatagattt
ttaaagatgagaggaatggaaattttgggaaatctttgcaaagcggaagataatggcgtt
ttgatttgtgaatatgtggatcaagactcatacagagagatcatctgtcatctcacttta
cctgacgtgctgctcgtgatctcaacactcgaggtgctatatatgctcacagaaatggga
gatgttgcttgcacaaaaattgcaaaagtcgaaaagagcatagacatgttagtgtgtctg
gtttctatggatatccagatgttcggtcctgatgccctagctgcagtgaaactcgtcgaa
catccaagttccagccatcaagttttgtctgatattaggccacaagctgtagaacaagtt
caaacccagacccatgtagcatctgtcccagcttccagagcagttgtagcacagcatgtt
ggtccacctccaggaatagtggaaatagatagtgagaagtttgcttgtcagtggctcaat
gctcattttgaagtaaatccagattgttctgtctctcgagcagaaatgtattctgaatac
ctctcaacttgtagtaaattagcccgtggtgggatcctaacatcaactggattttataaa
tgtcttagaacggtcttcccaaatcacacagtgaagagagtggaggatcccagtaacaat
gggcaagcgcatattcatgtagtaggggtgaaacggagggctataccacttcccattcaa
atgtactatcagcagcaaccagcttctactccagttgttcgggttgattctgtttctgag
gtttctccagctccttcacctgcaggactccctcatggaccacaaactgtaggaaatcct
ttccagaggactcctgttaccaaccagtcttcaaatttgactgcaacacaaatgtctttt
ccagtacagggtgttcatactgtggcacagactgtttcaagaattccaccaagtccttcc
gttcttacccaccagcagcaaagtgctccagtgactgtcattcaaaataaagctccaatt
ccttgtgaagttgttaaggctacagtaatccagaattctatacccccgtcagcagtacct
gttagtattgctgttggaggaggagctgcacaaggttctgtggttcagaatcatagtaca
gggccacagcctgttaccgttgtgaattctcagacattgcttcaccatccacctgtaatt
ccacagcagtctccattacacaccgtggtaccaggacaaataccttcaggcactcctgtt
acagtaattcagcaagctgtaccacagagtcatatatttggcagagtacagaatatacca
gcatgtacttctacagtttcacagggtcagcagttaatcaccacatcaccccaacctgtg
caaacttcatctcaacagacatcagctggtagccagccacaagacactgttatcatagca
ccgccacagtatgtaacaacgtctgcatccaatattgtctcagcaacttcagtacagaat
tttcaggtagctacaggacaaatggttaccattgctggtgtcccaagtcctcagccctca
agggtagggtttcagaacattgcaccaaaacctgtcccttctcaacaagtaccatcgacg
gtagtacagcagcctattcaacaaccacagcagccaacccaacaaagtgtcgtcatagta
agccaaccagctcaacaaggtcaaacttatgcaccagccattcaccaaattgttcttgct
aatccggcaactcttccagctggtcagacagttcagctaactggacaaccaaacataact
ccatcctcctcaccatcacctatcccagctacaaataaccaagtccctacggtcatgtca
tcttcagcttccacccctcaatcacaagggccaccccctacagtcagtcaaatgctatct
gtgaaaaggcagcagcagcagcagcagcagcagcattcaccagcacccccaccacaacag
gtacaagtacaagttcaacagccacagcagacgaacacaggaattagtcagcctgcttct
ggtgaatcaagtttaataaaacaattgctgcttccaaagcgtggtccttcaactccgggt
gggaagcttattctcccagctccacagattcctccccctaataacgcaagagctcccagc
cctcaagtggtctatcaggtggccaataaccaagccacaggttttggagtacaggggcaa
actccagctcagcaactattggtgggacagcaaaatgttcagttggtccaaagtgcattg
ccaccaacaggaggagtacaaaccatgcccatctctaacttacagatattgccaggccca
ctgatctcaaatagtccagcaaccattttccaaggaacttctggcaaccaggtaaccata
acagttgtgccaaatacaagttttgcaactgcaactgtgagtcagggaaatgcaacgcag
ctcattgctccagcaggaatcaccatgagcggaacacaggcaggagttggacttcaggta
caaccgcttccagccactcaagcatctccagctggacaatcaccatgtactactgctact
cccccattcaaaggtgataaaataatttgccaaaaggaggaggaagcaaaggaagctaca
ggtttacatgttcatgaacgtaaaattgaagtcatggagaacccgtcctgccgacgagga
gccatgaacaccagcaatggggacacaaaagaaaatgaaatgcaggtgggaagtctttta
aatgggagaaagtacagtgactcaagtctacctccttcaaactcagggaaaattcaaagt
gaagctaatcagtgctcactcatcagtaatgggccatggttagaattaggtgagaatgga
gcatctggaaaacaaaacgcagaacaaatggacatgcaggacatcaaaagtgatttcaaa
aaatccctagttaatggaatctgtgattttgataaaggagatggttctcacttaagcaaa
aacattccgaatcacaaaacttccaatcatgtgggaaatggtgagatatctccagtggaa
ccacaagggactttagatgccactcagcaagatactgccaaaggtgatcaactagaaaga
ttttctaatggaccgatattaacttggggtggttcaccatctgcgtgcagtatacaggag
gcttcaagtgtggcaacacagcaatttagtggtactgacttgcctaatggacctctagct
tcaagtttgaattcagatgtgcctcagcaacgcccaagtgtagtcgtctcaccacattct
acaacctctgttatacaggggcatcaagtcattgcagttccccactcaggatcgagagta
tcccagtctcctgccctgtcatcggaagttcggtctacaaatggcacagcagattgcaga
cccgtgaagaggccagcagaggacactgatagggaaacagtcacagggattccaaataaa
gtaggggtgagaattgttactatcagcgaccccaacaacgctggctgtagtgcaacgatg
gtcgcggtgccggccggagcagatccaagcactgtagctaaagtagcgatagaaagtgct
gtccagcaaaagcagccccatccaccaacgtatgtaccgaatgctccccagaacactcct
atggcaccgtcagcagccgtgcaagtgcagggccaccagcccagcagctctcagccttct
ccattcagtggatgcagtcagcttggagatcccatgagaaagcctgggcaaaacttcatg
tgtctgtggcagtcttgtaaaaagtggtttcagacaccctcgcaggttttctaccacgca
gcaactgaacatggaggaaaagatgtctatccagggcagtgtctttgggaaggttgtgag
cctttccaacgacaaaggttttcttttattacccacttacaggataagcactgttcaaag
gatgccctgcttgcaggattaaaacaggatgaaccaggacaagcaggaagtcaaaaatct
tctaccaagcagccaactgtagggggtaccagctcaactccgagagcacaaaaggtcatt
gtgaaccatcccagtgcggcattgatggctcttaggagaggttcaagaaaccttgtcttt
cgagattttacagatgaaaaagagggaccaataactaaacacatccgactaacagctgcc
ttaatattaaaaaatattggtaaatattcagaatgtggtcgcaggttgctaaagagacac
gaaaacaacttatcagtgctagccattagtaacatggaagcttcctccacccttgccaaa
tgcctttatgaacttaattttacagttcagagtaaagaacaagaaaaagactcagaaatg
ctgcagtga
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integrated database retrieval system
