Echinops telfairi (small Madagascar hedgehog): 101656853
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Entry
101656853 CDS
T08707
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03082
ATP-dependent chromatin remodeling
etf04714
Thermogenesis
etf05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101656853 (SMARCA2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
101656853 (SMARCA2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101656853 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
etf03021
]
101656853 (SMARCA2)
03036 Chromosome and associated proteins [BR:
etf03036
]
101656853 (SMARCA2)
Transcription machinery [BR:
etf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101656853 (SMARCA2)
Chromosome and associated proteins [BR:
etf03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
101656853 (SMARCA2)
Chromatin remodeling factors
BAF complex
101656853 (SMARCA2)
PBAF complex
101656853 (SMARCA2)
GBAF(ncBAF) complex
101656853 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
101656853
NCBI-ProteinID:
XP_004714508
LinkDB
All DBs
Position
Unknown
AA seq
1566 aa
AA seq
DB search
MSTPADPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHAMPTM
GSGDFSQEGLHQTHKPMDGVQDKGIAEETHCGTLKNAGMRPPHPGIGPPQSPMDQHSQGY
MSPHPSPLGAPEHVSSPMSTGGPPAPQMPPSQPGPLISSDPQAMSQPSRGPSPFSPVQLH
QLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQQPPPPPQPQPPALLSFNRVSGPG
PEMSGPSVAQKLPAPTPSGRPSPAPPTPAQPPAAAVPGPSAPQAAPGQPSPVLQLQPKQS
RISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLPGSLPPDLRTKATVELKALRLL
NFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQ
KHQEYLNSILQHAKDFKEYHRSVAGKTQKLSKAVATWHANTEREQKKETERIEKERMRRL
MAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTSLVWEHKQAQAAKEKKKRRRRKRKA
EENAEGGEPALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGSEAPKASQLDAWLEMNPG
YEVAPRSDSEESSSDYEEEDEEEESGRQDTEEKILLDPNSEDVSEKDAKQIIETAKQDVD
DEYSMQYSARGSQSYYTVAHAISERVERQSALLINGTLKHYQLQGLEWMVSLYNNNLNGI
LADEMGLGKTIQTIALITYLMEHKRLNGPYLILFSLRRTLSNWTYEFDKWAPSVVKISYK
GTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQ
VLNTHYVAPRRVLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVD
LNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKG
ILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAEL
YRASGKFELLDRILPKLRATSHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDR
AALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQ
QNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEE
ENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLLEEDELPSWII
KDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDTLTEKQWLRAIEDGNLEEMEEEVRLKK
RKRRRNVVERDPAVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDRCNV
EKVPSNSQLEIEGNSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRS
LGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNEEEEEE
EEESESEAKSVKVKIKLKKKDEKGREKGKGKKKPNRGKAKPVVSDFDSEEEQDENEQSEA
SGTDDE
NT seq
4701 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcccgcagaccctggcgcgatgccccacccggggccttcgccagggcccgga
ccctccccaggaccgattctgggacccagccccgggccaggcccatccccaggctccgtc
cacagtatgatgggacccagccccgggcctccgagcgtctcgcacgcgatgccgacgatg
gggtctggggatttctcccaggaagggctgcatcagacgcataagcccatggatggggta
caagacaaggggattgccgaagagacccactgcggcaccttgaagaatgctgggatgcga
cccccacacccagggataggtcctccccagagcccgatggatcagcacagccaaggttac
atgtccccgcacccgtctccgctgggagccccagagcatgtgtccagtcccatgtccacc
ggagggccaccagctccccagatgccgcccagccagccagggccgctcatctccagcgac
ccgcaggccatgagccaacccagcagaggcccctcgcctttcagcccggttcagctgcac
cagcttcgagctcagattttggcctacaagatgctggcccgtggccagccactccctgaa
acactgcagctcgccgtccaggggaaacggacactgccgggcatgcagcagcagccgccc
cctccgccccagccccagccgccagccctcctgagcttcaaccgagtatccggcccaggg
cccgagatgagtgggcccagtgttgcacagaagcttcctgcacccacacccagtggccgg
ccctcgcccgcgccccccacccctgcgcagccccccgcggccgcagtgccgggaccctct
gcgccacaggcagccccgggacagccgtcgcccgtcctgcagctgcagccgaagcagagc
cgcatcagccccatccagaagccgcagggcctggaccccgtggagatcctgcaggagcga
gagtacagactgcaggcccgcatcgcacacaggatccaggagctggaaaacctgcccggc
tccctgcccccggacttacggaccaaagccaccgtggagctgaaggcgctgcggctgctc
aatttccagcgtcagctgaggcaggaggtggtggcctgcatgcgccgggacaccaccctg
gagacggccctcaactccaaggcctacaagcgcagcaagcggcagacgctgcgcgaggcc
cgaatgacggagaagctggagaagcagcagaagatcgagcaggagcggaagcggagacag
aagcaccaggaatacctgaacagcatcctgcagcatgcgaaggacttcaaggagtaccac
cgctcagtggccgggaagacccagaagctttccaaggcggtggccacctggcatgccaac
acagagagggagcagaagaaggagacggagcggatcgagaaggagaggatgcggaggctg
atggccgaagacgaagagggttacaggaagctgatcgaccagaagaaggaccggcgcctg
gcctacctcctgcaacagacagatgagtatgtggccaacctgaccagcctggtgtgggag
cacaagcaggcacaagcggccaaggagaagaagaagaggaggaggaggaagaggaaggcc
gaggagaacgcagaaggaggggagcctgccctggggccggacggagagcccatcgatgag
agcagtcaaatgagtgacctgccggtcaaggtgacccacacggaaacagggaaggtcctc
ttcggatcggaagctcccaaggccagccagctggatgcctggctggaaatgaacccaggc
tacgaggtggcccctcggtcggacagcgaggagagcagctctgattacgaggaggaggac
gaggaggaagagtctgggaggcaggacacggaggagaagatccttctggaccccaacagt
gaagacgtgtcggagaaggacgccaagcagatcattgagacggccaagcaggacgtggac
gacgagtacagcatgcagtacagtgcgcggggctcccagtcctactacacggtggcccac
gccatctcggagcgcgtggagaggcagtcggccctgctcatcaacggcaccctgaagcac
taccagctgcagggcctggagtggatggtgtccctgtacaacaacaacctgaacggcatc
ctggccgacgagatgggcctgggcaagaccatccagaccatcgccctcatcacctacctg
atggagcacaagcgcctcaacgggccctatctcatcctgttctccctccgcaggaccctc
tccaactggacgtacgaatttgacaaatgggctccctccgtggtgaagatctcttataag
ggcactcccgccatgcgccgctccctcgtcccccagctgcgcagcggcaagttcaacgtg
ctcctgacgacatacgagtacatcatcaaagacaagcacatcctcgccaagatccgctgg
aagtacatgatcgtggacgagggccaccgcatgaagaatcaccactgcaagctgacccag
gtcctcaacacccactacgtggctccaagaagggtcctcctgaccgggaccccgctgcag
aacaagctgcccgagctctgggccctcctcaacttcctgctccccacgattttcaagagc
tgcagcaccttcgagcagtggttcaacgctcccttcgccatgactggagaacgggtggac
ttgaacgaggaggagacgattctaatcatcaggcgtctgcacaaggtgctaagacccttt
ttactgaggaggctgaagaaggaagtggagtcccagcttccagaaaaggtggagtacgtg
atcaagtgcgacatgtcagccctgcagaagatcctgtaccgtcacatgcaggccaagggc
atcctgctcacggacgggtctgagaaagataagaaggggaaagggggcgccaagaccctc
atgaacaccatcatgcagctgaggaagatctgcaaccacccgtacatgttccaacacatc
gaggaatcctttgccgagcacctgggctattcaaacggagtcatcaatggggcggagctg
taccgggcctcggggaagttcgagctgctggaccgcattctgcccaagctgagggcaacc
agccaccgggtgctgctcttctgccagatgacgtccctcatgaccatcatggaggactac
ttcgctttccggaactttctctacctgcgcctcgacggcaccaccaagtccgaggaccgc
gcggcgctgctgaagaaattcaacgagccgggctcacagtacttcatcttcctgctgagc
acccgggccgggggcctgggcctcaacctccaggcggccgacacggtggtcatctttgac
agcgactggaacccccaccaggacctgcaggcgcaggaccgcgcgcaccgcatcgggcag
cagaatgaagtgcgtgtgctccgcctctgcacggtcaacagcgtggaggagaagatcttg
gccgccgccaagtacaagctcaacgtagaccagaaggtgatccaggccggcatgttcgac
cagaagtcctcgagccacgagcggcgggccttcctgcaggccatcctggagcatgaggag
gaaaacgaggaagaagacgaggtcccagacgatgagacgttgaaccagatgattgcccgg
cgtgaagaagaattcgacctgttcatgcgcatggacatggaccggcgccgggaggacgcg
cggaacccgaaacgcaagccgcggctcctggaggaggacgagctgccctcgtggatcatc
aaggatgacgccgaggtggagcggctgacctgcgaggaggaggaggagaagatcttcggc
aggggctcccgccagcgccgggacgtggactacagcgacaccctcacggagaagcagtgg
ctgagggccatcgaagacggcaatctggaagaaatggaggaggaagtgcggctgaagaag
cggaagagacgacgcaacgtggtggagagagaccccgccgtgaaagaggacgtggagaag
gccaagaagcggcgaggccggcctccggcggaaaaactgtcccccaacccccccaaactg
accaagcaaatgaacgccatcatagacacggtgatcaactacaaagacaggtgtaacgtg
gagaaggttcccagcaactcccagttggaaatagaaggaaacagctccgggcggcagctc
agcgaagtcttcatccagctgccctcccggaaggagttacctgagtactacgagctgatt
cggaagcccgtggatttcaaaaaaattaaggagcggatccggaaccacaagtatcgcagc
ctgggggacctggagaaggacgtcatgctgctgtgccacaacgctcagaccttcaacctg
gagggctcccagatctatgaggattccattgtcctgcagtcagtatttaagagcgcccgg
cagaaaatcgccaaagaggaggagagcgaggatgagagtaatgaggaggaggaggaagag
gaggaggagtctgagtctgaggcaaaatctgtgaaggtgaagatcaagctcaaaaagaaa
gacgagaaaggcagggagaaggggaagggcaagaagaagccgaaccgaggcaaagccaag
cctgtcgtgagcgatttcgacagcgaggaggaacaggacgagaatgaacagtcagaagcc
agcgggacggacgacgagtga
DBGET
integrated database retrieval system
