Echinops telfairi (small Madagascar hedgehog): 101657569
Help
Entry
101657569 CDS
T08707
Symbol
PNN
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03013
Nucleocytoplasmic transport
etf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101657569 (PNN)
03015 mRNA surveillance pathway
101657569 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etf03019
]
101657569 (PNN)
03041 Spliceosome [BR:
etf03041
]
101657569 (PNN)
Messenger RNA biogenesis [BR:
etf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101657569 (PNN)
Spliceosome [BR:
etf03041
]
Complex C
Other components
EJC/TREX
101657569 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
101657569
NCBI-ProteinID:
XP_004699007
LinkDB
All DBs
Position
Unknown
AA seq
692 aa
AA seq
DB search
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATSKERTRRDLIQDQNMDEKGKQRNR
RIFGLLMGTLQKFKQESTVANEKQKRRQEIEQKLEVQAEEERKQVENERRELFEERRAKQ
TELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPHLFYIPGRMCPATQKLIEESQRKM
NALFEGRRIEFAEQINKMEARPRRQSMKEKEHQVVRNEEQKAEQEEGKMAQREEELEETG
NQHNDVEIEEAGEEEEKEVGIVHSDPEKEQEEEEQKQEIEVKVEEEMGARESEKQQDSHP
EEVMDVLEMADNAKHAIVEQETMETNQVESIEPSENETSKEMEPEMEFEVELDKECKALS
PAKENSTSVVEIEKEPEENEKESEPQPEPINQPPPQIQSQSQSQPQPTLQPPPLSQPEAL
QLTVSQPPPQVIQEQGHSLPERKEFPVESVRLSEVPPEPVLAVLVDSKGKTKTRSRSRGR
ARNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSST
TSSSESRSRSRGRGHNRDRKHRRSVDRKRRDTSGLERSHKSSKGGSSRDTKGSKDKNSRS
DRKRSMSESSRSGKRSSRSERDRKADRKDKRR
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgcagtgagaactttgcaggagcagctagaaaaggccaaagagagcctcaag
aacgtggatgagaatattcgcaagctcaccgggcgggatccaaatgacgtgaggcccatt
caagccagattgctagccctttctggtcctggtggaggtagaggacgtggtagtttattg
ctgaggctgggcggggagcgtcggacgaggagagaatcgcgccaagaaagcgacccagag
gatgatgatgttaaaaagccagcgttgcagtcttcagttgtagctacctccaaagagcga
acacgcagagaccttatccaggatcaaaatatggatgaaaagggaaagcaaaggaatcga
cggatatttggcttgttgatgggcacacttcagaaatttaaacaagaatccactgttgcc
aatgaaaagcaaaagagacgacaggaaattgaacaaaaacttgaagtgcaggcagaagaa
gagagaaaacaggttgaaaatgagaggcgagagctgtttgaggagaggcgtgctaaacag
acagaactgcggcttttagaacagaaagttgagcttgcgcagctgcaagaagaatggaat
gagcataatgccaagataattaaatatataagaactaagacaaagccccatttgttctat
attcctggaagaatgtgtccagctacccaaaaactaatagaagagtcacagagaaaaatg
aatgctttatttgaaggtagacgcatcgaatttgcagaacaaataaataaaatggaggct
aggcctagaagacaatcaatgaaggaaaaagagcatcaggtggtgcgtaatgaagaacag
aaggcggaacaagaagagggtaagatggctcagcgtgaggaagaattggaggagacaggt
aatcagcacaatgatgtagaaatagaggaagcaggagaggaagaggaaaaggaagtaggt
atagttcatagtgatccagaaaaagaacaggaggaggaggagcagaagcaggaaatagag
gttaaggtggaggaagaaatgggggcaagggaaagtgaaaagcagcaggatagtcaccct
gaagaagttatggatgtgctagaaatggctgacaatgccaaacatgcgattgttgagcag
gagacaatggaaacaaatcaagttgaaagtatagaaccttcagaaaatgaaactagcaaa
gaaatggagccagagatggagtttgaagttgagctagataaagaatgtaaagctctttct
cctgcgaaagagaatagtactagtgttgtagagatagaaaaggagcctgaggaaaatgaa
aaggaatctgagccccaaccagagccaatcaatcaacctccaccccaaatccaatctcag
tcccaatcccaaccccagccaacacttcagcccccacctctttctcagcctgaggctttg
caattgactgtttcacagccaccacctcaggtgatccaggagcaagggcattcactacct
gagaggaaggaatttcctgtagaatctgtgagactcagtgaagtgccaccagagccagtc
ttggcagtgcttgtagacagcaaaggcaaaacgaaaactaggagcaggagcagaggtcgg
gctagaaataaaactagcaagagtagaagtagaagcagtagcagtagtagttctagtagc
agttcaaccagtagcagcagtggcagcagttctagcagcggcagcagcagtagtcgaagt
agttccagtagtagctcgagtactagtggcagcagcagcagagacagtagcagcagcact
acaagtagtagtgagagtagaagtcggagtaggggcaggggacataatagagatagaaag
cacagaaggagcgtggatcggaagcgaagggatacttcgggactagaaagaagtcacaaa
tcttcaaaaggtggtagtagtagagatacaaaaggctcaaaggataagaattctcggtcc
gacaggaaaaggtctatgtcagagagtagtcgatcaggcaaaagatcttcaagaagtgaa
agagaccgaaaagcagacaggaaagacaaaaggcgttaa
DBGET
integrated database retrieval system
