Echinops telfairi (small Madagascar hedgehog): 101657711
Help
Entry
101657711 CDS
T08707
Symbol
DHX38
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101657711 (DHX38)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
etf03041
]
101657711 (DHX38)
Enzymes [BR:
etf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101657711 (DHX38)
Spliceosome [BR:
etf03041
]
Complex C
Other components
Step II factors
101657711 (DHX38)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
Motif
Other DBs
NCBI-GeneID:
101657711
NCBI-ProteinID:
XP_004704868
LinkDB
All DBs
Position
Unknown
AA seq
791 aa
AA seq
DB search
MEDASEDASIHRLEGTDADSQVGGLICKTKSAASEQHVFKAPAPRPSLLGLDLLATLKRR
EREEKDDGEDKKKSRISSYKDWEEGKDDQRDSEEEDSDQSDRSSRKDRHYRSARVETPSH
PGGVSEEFWERSRQRERERREHGVYASSKEEKDRKKEKPRDRDYDRKRERDERDRSRHSS
RSERDGGSERSSRRNEPESPRHRPKDAATPSRSTWEEEDSGYGSSRRSQWESPSPSPSCR
DSERSHRPSTRERDRSVRSKYSDDTPLPTPSYKFNEWADDRRHLGSTPRLSRGRGRREVG
EEGISFDTEEERQQWEDDQRQADRDWYMMDEGYDEFHNPLAYSSEDYVRRREQHLHKQKQ
KRISAQRRQINEDNERWETNRMLTSGVVHRLEVDEDFEEDNAAKVHLMVHNLVPPFLDGR
IVFTKQVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTD
VLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFPVDILFSKTPQED
YVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQL
PSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQI
YPISQANANQRSGRAGRTGPGQCFRDEAGMEEYMQCVTAVDGEWLAELGPMFYSVKQAGK
SRQENRRRAKEEASAMEEEMALAEEQLRARRQEQEKRSPLGSVRSTKIYTPGRKEQGEPM
TPRRTPARFGL
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgccagcgaggacgcttccatccaccgattagaaggcactgatgcggactct
caggttggcggccttatctgcaagaccaagagtgcagctagtgagcagcatgtcttcaag
gcccctgctccccgcccctcactgctgggcctggacttgctggccaccctgaaacggagg
gagcgagaggagaaggatgatggagaggacaagaagaagtccagaatctcttcttacaag
gactgggaagagggcaaggacgaccagagggattcggaagaggaggacagtgaccagtcc
gaccgaagtagtcggaaagaccgacattatcgctctgcccgagtagagacaccatcccat
cctggtggtgtgagcgaagagttctgggaacgcagtcggcagagagagcgggagcggcgg
gagcacggtgtctacgcctcatccaaagaggagaaggaccggaagaaagagaaaccacgg
gaccgagactacgaccggaagagagagagagatgagcgggacagaagtcggcacagcagc
agatcggagcgagatggaggctccgagcgcagcagcagacggaatgaacctgagagcccc
cgccatcgacccaaagatgctgccactccatcaaggtccacctgggaggaagaggacagt
ggctacggcagctcgaggcgctcgcagtgggagtcaccctccccatcgccttcctgtcgg
gactctgagaggagccaccggccttccactcgagagcgagataggtctgtgaggagtaag
tactctgatgacacacctctgccaaccccgtcttacaaattcaacgagtgggccgatgac
agaagacacctggggtccacgccgcggctgtccaggggccgaggaaggcgtgaggttggt
gaggaaggaatttcgtttgacacagaagaggagcggcagcagtgggaggatgaccagagg
caagctgaccgggactggtacatgatggatgagggctacgatgagttccacaatcccctg
gcctactcatccgaggactacgtgaggcggcgggaacagcatctgcacaagcagaagcag
aagcgcatttcggcccagcggaggcagatcaatgaggacaacgaacgctgggaaactaac
cggatgctcaccagtggagtggtccatcgactggaggtagatgaagacttcgaggaggac
aatgcagccaaggtgcatctgatggtgcataacctggtgcctcccttcctggacggccgc
attgtcttcaccaagcaggtgggttatgccatccgctttgaagactgcacttcggaaaac
accttgatcaagtacatgacggatgggattctgctgcgcgagtcccttcgggaagctgac
cttgatcactacagtgccatcatcatggacgaggcccatgagcgctcccttaacaccgat
gtgctgtttggcctgctccgagaggtggtggctcggcgctcagacctgaagctcatcgtc
acctcagccacgatggacgcagaaaagtttgcctcctttttcgggaacgttcccatcttc
cacatccctggccgcaccttccctgtggacatcctcttcagcaagactccgcaggaggat
tatgtggaggctgcagtgaaacagtccttgcaagtacacctgtcgggggcccctggggac
atcctcatcttcatgcccggccaggaggacatcgaggtgacctctgaccagattgtggaa
catctggaggaactggagaacgcgcctgccttggccgtgcttcccatctactcccagctg
ccttctgacctccaggccaaaatctttcagaaggccccggatggtgttcggaagtgtatc
gttgccaccaacattgctgagacctccctgacagttgatggcatcatgtttgttattgat
tctggttattgcaaattaaaggtcttcaacccccggattggcatggatgctctgcagatc
taccccatcagccaggccaatgctaaccagaggtcgggacgagccggcaggacgggccca
ggtcagtgtttcagagatgaagcaggcatggaggagtacatgcagtgtgtgaccgccgtg
gatggggagtggctggcggagctgggcccaatgttctacagtgtgaagcaggctgggaag
tcacggcaggagaaccgccgtcgggccaaagaggaagcttctgccatggaggaggagatg
gcgctggctgaggaacagctgcgagcccggcgacaggaacaggaaaagcgcagccccctg
ggcagtgtcaggtctacaaagatctacactccagggcggaaagagcaaggggagcccatg
acccctcgccgcaccccagcccgctttgggctctga
DBGET
integrated database retrieval system
