Echinops telfairi (small Madagascar hedgehog): 101658180
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Entry
101658180 CDS
T08707
Symbol
COPB1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
etf04131
]
101658180 (COPB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
etf04147
]
101658180 (COPB1)
Membrane trafficking [BR:
etf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
101658180 (COPB1)
Exosome [BR:
etf04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
101658180 (COPB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Coatamer_beta_C
Coatomer_b_Cpla
HEAT
HEAT_2
Cnd1
HEAT_EZ
Arm
MMS19_N
Img2
Motif
Other DBs
NCBI-GeneID:
101658180
NCBI-ProteinID:
XP_004711619
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MTAAENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVHTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPAHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDSNEAAAADV
LEFVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEIR
RSLGEIPIVESEIKKEAGELKPEEEITVGPVQKLVTEMGTYATQSALSSSRPTKKEEDRP
PLRGFLLDGDFFVAASLATTLTKVALRYVALVLEKKKQNSFVAEAMLLMATILHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSHMLSAKLEEEKLSQKKESEK
RNVTVQPDDPISFMQLTAKNEMNCKEDQFQLSLLAAMGNTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPATCTDAEF
RQMWAEFEWENKVTVNTNIIYLNEYLQHILKSTNMKCLTPEKALSGYCGFMAANLYARSI
FGEDALANVSIEKPIHQGPEAPVTGHIRIRAKSQGMALSLGDKINLSQKKTSF
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgcagagaacgtatgctatacgttaattaatgtgccaatggattcggaacca
ccgtcggaaattagcttaaagaatgatctagaaaaaggagatgtgaagtccaagacggaa
gctttgaagaaagtcatcatcatgattctgaatggtgagaagctccccgggctcctcatg
accatcatccgcttcgttcttccacttcaggatcacaccatcaaaaaattgcttctggtg
ttttgggaaattgttcctaaaacaactccagatgggagactcttacatgaaatgatcctt
gtatgtgatgcttacagaaaggatcttcagcaccctaatgagtttattcgaggatctact
cttcgttttctttgcaaattgaaagaagcagagttgctagaaccgttaatgccagctatt
cgtgcttgtttggagcatcgacacagctatgttagaagaaacgctgttctggccatctat
actatctataggaattttgaacatcttatacctgatgctcctgagctgatacatgatttt
ttggtgaatgagaaggatgcaagttgcaagaggaatgcatttatgatgctcattcatgca
gatcaggatcgagctttggattacttaagtacttgtattgatcaagttcacacatttgga
gacattcttcagttagttattgttgaattaatttataaggtctgtcatgctaatccatca
gaaagggctcgtttcatccgctgcatctataacttactgcagtcgtccagccccgctgtg
aaatacgaagctgctggcacattggtgaccctctctagtgcaccaactgctatcaaggct
gctgctcagtgctacattgatttaattattaaggagagtgacaacaacgtgaagctcatt
gttctggatcggctgatcgaattaaaagagcatccagcacatgaacgagtactacaggat
ctggttatggacatcctaagagtgttgagcaccccagacttagaagtgcgcaagaagact
ctgcagttagcactggatcttgtgtcttctaggaatgttgaagagctggttattgtcctg
aaaaaggaagtgattaaaacaaataatgtgtcggagcatgaagatactgacaaatacagg
cagctcctggtgcggacattacattcttgctctgtccgatttccagatatggccgcaaat
gttattcctgtgttaatggaatttctaagtgacagcaacgaagcagcagctgctgatgtc
ttggagtttgttcgtgaagccattcagcgctttgataacttgagaatgcttattgttgaa
aagatgctggaagtttttcatgctattaaatctgtcaagatttaccgaggagcattgtgg
atcctgggagagtactgtagtaccaaggaagacattcagagtgtgatgactgaaatccgc
aggtcccttggggagatcccaattgttgagtcagaaataaagaaagaagcaggtgaatta
aaacctgaagaagaaataactgtggggccagttcagaaattggtaactgagatgggcacc
tatgcaactcagagcgcccttagcagttcccgacctaccaagaaagaggaagacaggcct
cccctgagaggattccttttggatggagatttctttgttgctgcctcccttgctacaact
ctgaccaaggttgccttgcgttatgtagctttggttctagagaagaagaagcaaaattct
tttgttgccgaggctatgctactcatggctacgatccttcatttgggcaaatcctctctt
cccaagaagccaattacagatgatgatgtagatcgaatttccctgtgcctcaaggtcttg
tcagaatgttcacctttaatgaatgacatttttaataaagaatgcagacagtccctttct
cacatgttatctgcgaaacttgaagaagagaaattatctcagaagaaagaatctgaaaag
aggaatgtgacagtacagcctgatgaccctatttccttcatgcaactaactgctaagaat
gaaatgaactgcaaggaagatcagttccagctgagcttgttggcagcaatgggtaacaca
cagaggaaggaggcagcagatcccctggcatctaaacttaacaaggtcacccagttgaca
ggtttctcagaccccgtgtatgctgaagcttatgttcacgtcaaccagtatgatattgtc
ctggatgtgctcgttgtgaaccaaaccagtgatactttgcaaaactgcacattggaatta
gctactcttggggatttgaaacttgtggaaaaaccatctcctttgactcttgctcctcat
gattttgcaaatattaaagctaatgtcaaagtagcatcaacagaaaacggaataattttt
ggtaacatagtttacgatgtctctggagcagcaagtgacagaaattgtgtggtgctcagt
gatatccacattgacatcatggactatatccagcctgcgacttgcactgatgctgagttc
cggcagatgtgggccgaatttgaatgggaaaacaaagtgacggttaacacaaatataatt
tatttaaacgagtacttacagcacatattaaagtcaaccaacatgaaatgcctcactcca
gaaaaggctctctctggttactgtggctttatggcagccaacctctacgctcgctccata
tttggagaagatgcacttgcaaatgtcagcattgagaagcctattcaccagggaccagag
gcccctgttactggccatataagaatccgtgcaaagagtcagggaatggccctaagtctt
ggagataaaatcaacctgtctcagaagaaaactagtttttaa
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