Echinops telfairi (small Madagascar hedgehog): 101658790
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Entry
101658790 CDS
T08707
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X4
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
etf03036
]
101658790 (CHD9)
Chromosome and associated proteins [BR:
etf03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
101658790 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_CHD1_Hrp3
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
101658790
NCBI-ProteinID:
XP_004704729
UniProt:
A0ABM0IPF4
LinkDB
All DBs
Position
Unknown
AA seq
2886 aa
AA seq
DB search
MTDPMMDFFDDANLFGETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLSHVQGTP
THQKMADFEQLNQFDSLKFHQVNQSFGSPAEHVLSPHSQFNCSPIHPPNQSNGLFPDVAD
GSPMWGHQTATSISNQNGSPFHQQGHSHSMHQNKGFVAHHDFALFQANEQQTQCTSLRSQ
QNRSNLNPGQNSLGQSKTFMDVNVSGPHRVRVNHPPQITNASTSQQPLSMQQFSQTSNPS
IHFLKCSTLQEGNFNGPSPNMTSCSVSNPQPFSSHYSFSSSHLSSNSLLPPSAVLSSNHT
NQTLSDFTGRNSFSPHRGIKQESTQHILNPTTSLNSNNFQMLHSSHPQGNYGNSKLSPVH
MNFPDPVDSGTPMGHFNDHVETNGFSSLEENLLHQVESQTEPFTGLDPEDLLQEGILPHF
DESTFGQDSSSHVLDHDLDRPFTSHFITRPSDMAQAQLQSQVRAWHSSLSNHQHLHDRNR
LCLQRQPPSSKKSDGSGTYTKLQNTQVRGMSEKKQRKKMESESKQEKANRIISEAIAKAK
ERGERNIPRVMSPENFPSASIEGKEEKRGRRAKCKPKDKESKKIKTCSKLKEKTKIGKLI
ITLGKKQKRKNESSDEISDSEQKPQHVLKDEDSQKRRSNRQIKRKKYGEAAEGKQCEEAV
KSSMKIKKNSVSLPGEQPLQLFVENPSEEDAAIVDKILSSRTVKKEISSGVMIDMEEFFV
KYKNYSYLHCEWATEEQLLKDKRIQQKIKRFKLRQAQRAHFFSDMEEEPFNPDYVEVDRV
LEVSFCEDKDTGEPVIYYLIKWCSLPYEDSTWELKEDVDLTKIEEFEQLQASSPDTRHLD
RPPSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITF
LSEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHGSLISRQMIQQYEMYFRDS
QGHIIRGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNL
EHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMM
LRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQTNVPNLVNTMM
ELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGG
HKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCT
RAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFD
RASLKLGLDRAVLQSMSGRENHVSGIQQLSKKEIEDLLRRGAYGAIMEEEDEGSKFCEED
IDQILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAIS
GRNSLVIDTPRIRKQTRPFSATKDELAELSEAESEGDEKPKLRRPCDRSNGYGRTECFRV
EKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRALLAYCLVHYRGDEKIKGFIWDLIT
PTEDGQTRELQNHLGLSAPVPRGRKGKKVKTQTSSFDIQKAEWLRKYNPEQLLQDEGYKK
HIKHHCNKVLLRVRMLYYLKQEVIGNECQKVFDGVDASDIDVWVPEPDHSEVPAEWWDFD
ADKSLLIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYMDGDVEDPEYR
PAPALFKDDIEDDVSSPGDLIIADGDGQLMEGDKVYWPTQSALTTRLRRLITAYQRTNKN
RQIQQIPPTFSVPASVMQPLYEEATLNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFD
PDRGQFDWTKFRAMARLHKKTDDSLEKYLYAFMSMCRRVCRLPSKEELVDPNIFIQPITE
ERASRTLYRIELLRKVREQALRHPQLFERLKLCHPNPDLPIWWECGSHDRDLLIGAAKHG
VSRTDYHILRDPELSFMAAQRNYSQSKMAHSRTSTPLLQQYQVALSASSLTSLPRLLDAK
GIILEDMKVKSENLKEEPQSSEEESMSSEETRTLIKSEPLSPKNGVLPQATGDQKSGGKG
ETDRRMVAARTEPLTPNPSSKKQRVHKRGSESSSDSDSDSERSSCSSRSSSSSSSSSSSC
SHSRSGSSSSSSSCSSASSSSSSSSSSSSSSSSSSEESDSEEEEVQKREGTPHMKAYDEE
SVASLSTTQDETQDSFQMNNGTPESAYLLQGGYMLAASYWPKDRVMINRLDSICQTVLKG
KWPSARRSYDANTVASFYTTKLLDSPGAATEYSEPSVPTPSGAGVKEEHDQSPQMSKEGG
LKLTFQKQGLAQKRPLDSEDGALGQQQYLTRLRELQSASETNLVNFPKSPPVSGTSIQSA
VGANGAILDNQPIVKKRRGRRKNVEGVDILFFNRNKPPNHVTIGITASPISTGINPALSY
TPTQGTPDMESPVPVIHLKDGTRLAGDDAPKRKDLEKWLKEHPGYVEDLGAFIPRMQLHE
GRPKQKRHRCRNPNKLDINSLTGEERVQLINRRNARKVGGAFAPPLKDLCRFLKENSEYG
VAPEWGEVVKQSGFLPESMYERILTGPVVREEVSRRGRRPKSGISKVAAAAAAAAANATN
ISGNPLLANGLLPGVDLTTLQALQQNLQNLQSLQVTAGLMGMPASLSPGGEAKNMAAMFP
MLLSGMAGLPNLLGMGGLLTKPADSGTEEKKGHDSKELEGKKERTESQTPENGGENSVSS
SPSTSSSAALSTAAAANSLALNPLLLSNILYPGMLLTPGLNLHIPTLTQSNTFDVQKNKN
SDLSSTKSAEVKEEDSRVRDQEDKGGTEPSPLNENSTDEGSEKADASSGSDSASSSSEDS
DSSNED
NT seq
8661 nt
NT seq
+upstream
nt +downstream
nt
atgacagatccaatgatggatttttttgatgatgccaatctttttggtgaaaccttagaa
ggtttgtcagatgatgcattcgtacaaccaggacctgtttcactagttgatgaattgaac
ttgggtgcagaatttgaacctttgcacatagactcactaagccatgttcagggtactcca
acacatcaaaagatggctgattttgaacagttaaatcagtttgattcactgaaatttcat
caagttaatcagtcttttggcagcccagctgaacacgtgttatctcctcactctcagttt
aattgctctcctatccaccccccaaaccaatccaatggtttgtttccagatgtagcagat
gggagtccaatgtggggccatcagacagctactagcatttcaaatcaaaatgggtctcct
tttcaccaacaaggacattcccactctatgcatcaaaataaaggctttgtggcacaccat
gactttgccttatttcaggccaatgaacaacaaacacaatgtacatcactacgctcacaa
caaaacagaagtaatcttaacccagggcaaaattctcttgggcagtctaaaacttttatg
gatgttaacgtttctggtccccatagagtcagggttaaccacccaccacaaattactaat
gcatctacttcacaacagcctctttcaatgcagcaattttctcaaacatcaaatccttca
atacatttcctcaagtgtagcactcttcaagaaggaaattttaatggaccgtctccaaat
atgacttcttgttctgtaagtaatccacagccattttcttcacattattccttttccagc
agtcatttatcatcaaacagccttcttccgccctctgcagtgctttcgtctaatcacaca
aatcaaactttatctgattttactggaagaaattccttttcaccccatagaggaatcaag
caagaatccacgcagcatatcctaaaccccactacatcattgaattctaataatttccaa
atgttgcattcgtcacatcctcagggtaattatggcaattcaaaattatctcctgtgcac
atgaacttcccagatccggttgactcaggaacaccaatgggccatttcaacgatcatgta
gaaacaaatgggttttcatctttagaagagaatttacttcatcaagtggagtctcaaact
gaaccattcacaggacttgacccagaggaccttcttcaggagggtatccttccccatttt
gatgaatcaacgtttgggcaagatagttcaagtcatgtcttagatcatgaccttgatcgg
ccttttacatcacatttcataacaagaccttcggatatggctcaagctcagttgcaaagt
caggttcgggcctggcattcatcactttctaatcatcagcacttacatgatagaaaccgc
ctatgcttacaacgacagcctccatcttccaagaagagtgatggttctgggacatatact
aagttgcagaatacccaggtgaggggtatgtctgagaagaagcagagaaaaaagatggaa
tcagaaagcaagcaagaaaaggctaatcgtataatatcagaggccatagcaaaagcaaag
gagcgtggggaacgcaatattccgcgagtaatgagccctgaaaactttcctagtgcttca
attgaagggaaagaggaaaagagaggcagaagggcgaaatgcaagccaaaggacaaagag
agcaaaaaaataaaaacttgttccaaattaaaagagaagacaaaaattggtaaactcatt
attacattgggtaagaaacaaaaaagaaaaaatgagtcttcagatgaaatatctgatagc
gagcagaagccacaacatgtattgaaagatgaggactctcaaaaaagaagatcaaatcga
caaattaaaagaaaaaagtatggagaagcagcagaagggaaacagtgtgaagaagcagtt
aaaagttctatgaaaataaaaaagaattcggtttctttacctggtgaacagcccttacaa
ctatttgtggagaatcccagtgaagaagatgctgcaattgtggacaaaatattatcttcg
agaactgtgaaaaaggaaatatcctctggagtgatgattgatatggaagaattttttgta
aaatataagaattactcctaccttcactgtgaatgggctacagaagagcagcttttgaaa
gataaaaggattcagcaaaaaatcaaacgatttaaattgagacaagcacaaagagcacat
tttttctcagacatggaagaagaaccatttaacccagactatgttgaagtagacagagta
ttagaagtttcattttgtgaagataaggatactggtgagcctgttatttactacttaata
aagtggtgttcattgccatatgaagatagtacttgggaactaaaagaagatgtagatctt
acaaaaatagaagagtttgaacaattgcaagcttcaagccctgatacaagacatttggat
cgtcctccctctaatatttggaaaaaaatagatcaatccagggactataaaaatggcaac
caactcagggaatatcaactggaaggactcaactggctcttgttcaattggtacaataga
cgaaactgcattttagcagatgaaatgggtcttggcaaaaccattcaatcaattacattc
ctctccgaaatccttctaactggtatacgaggacccttcctgattattgctccactttct
actattgcaaactgggagagagaatttcgtacatggactgatattaatgttgtagtttat
catggaagcttaattagcagacaaatgatacagcaatatgagatgtacttcagggactca
caggggcatatcattcgaggtgcttacagattccaagccatcatcactacttttgaaatg
atccttggaggatgtggagaacttaatgcaattgaatggcgatgtgtaattattgatgaa
gcacataggttaaaaaataaaaattgtaaactcctagaaggcttgaaactcatgaatctg
gaacacaaggtgcttttgactggtacacctctccaaaatacagttgaagaactattcagt
cttcttcattttcttgaaccattaaggtttccctctgaatcaacatttatgcaagaattt
ggggatctgaaaacagaagaacaggtacagaagcttcaggctatcctgaaaccaatgatg
ctgagacgattgaaagaagatgtagaaaagaaattggcacctaaggaagaaaccatcatt
gaagtagagcttactaatattcaaaagaaatactaccgagctattttggagaagaacttt
tcatttttatctaaaggagcaggacaaacgaatgtccctaacttggttaataccatgatg
gaactcaggaagtgctgtaatcatccataccttataaaaggtgctgaggaaaaaatactt
ggagaatttagagatacttataatccagctgcttctgattttcatcttcaagcaatgatc
cagtctgctggtaaattggtcctgatcgataaattgcttcccaaaatgaaagcaggcggt
cataaagtactcatcttctctcagatggtacgctgcctcgatatcctggaggactatctg
atacataaaagatatttatatgagcgaatagatgggcgagtccgagggaatctacgacaa
gctgctatagatcgattcagtaagcctgattcagatcgatttgtttttcttctgtgtaca
cgagctggtggattaggcatcaacttaactgcagctgatacatgcataatttttgattct
gactggaatcctcaaaatgatcttcaggcccaagctcgttgccacagaattggtcagaac
aaagccgttaaagtgtaccgcctagtaactcgcaactcttatgagagagagatgtttgac
cgagccagtctgaaactgggcctagatagagctgtgttacagagcatgagtggacgagaa
aatcatgttagtggtattcaacagctctctaaaaaggaaatagaagacctgctccggaga
ggtgcgtatggtgccatcatggaagaagaagacgaaggctccaagttctgtgaagaggac
attgatcagattttacaacgacgtaccaaaactattacaattgagtcggaaggacgtggg
tcaacatttgccaaggcaagttttgtggcctctggaaaccggacagatatttccttagat
gatcctaatttctggcagaaatgggctaaaaaggcagaaatagatatagatgccatcagt
ggcagaaacagcttggttatcgacactcccagaattagaaagcaaacaagaccctttagt
gcgaccaaagatgaattagctgaattatctgaagctgaaagtgaaggagatgaaaagccc
aaactcagaagaccatgtgaccgctctaatggctatggaagaactgaatgttttagagtg
gagaagaatctgctagtatatgggtggggccgatggagagagattctctcccatggacgt
tttaaaaggcagctgaatgagcatgacgttgaaataatttgccgagcccttttagcatat
tgccttgttcactaccgaggagatgaaaaaatcaaaggcttcatatgggatctcattact
ccaacggaagatgggcaaacaagagagctgcaaaatcacctagggttgtcagctccagta
cccagaggtcgaaagggaaagaaagtaaagactcaaacaagctcatttgacatacaaaaa
gcagaatggcttcgaaaatataatcctgagcagctacttcaagatgaaggctataaaaag
catataaaacaccactgtaataaggttttgcttcgtgttaggatgctatattatctaaaa
caagaagtcattggaaatgaatgccagaaagtgtttgatggagttgatgcaagtgatatt
gatgtttgggtcccagaaccagaccactcagaagttcctgctgagtggtgggattttgat
gctgataagtcactccttattggagtttttaaacatggttatgagaaatataacactatc
cgagcagacccagcattatgcttcttggaaagagtgggaaagcctgatgagaaagcagtt
gctgctgaacaacgagcaaatgattatatggatggggatgtggaagatccagaatacaga
cctgccccagccctctttaaagatgatatagaggatgatgtttcttcaccaggagatctt
atcatagcagacggagatggtcagctgatggagggtgataaagtttattggcctactcag
tcagctttaaccacacggctgaggcgtctcatcacggcatatcagcgcaccaataaaaac
agacaaatccagcagataccgccaactttttcagtacctgccagtgtcatgcagcctctt
tatgaagaagccactcttaatcctaaaatggcagccaagatagaaagacagcagagatgg
acaaggagagaagaagctgacttttatagagttgtatctacatttggagtggtatttgat
cctgacagaggccaatttgattggacaaaatttagagctatggctagactacataagaaa
actgatgatagtttggagaaatatttgtatgcattcatgtctatgtgtcggagggtgtgc
cgtcttccttccaaagaagaattggtggatccaaacatttttatccagccaatcacagaa
gaacgtgcttctaggactttatatcgcattgagcttctaaggaaagtacgagaacaagct
ctccgacacccacaattatttgaacgcttaaagctttgtcatccaaatccagacttacct
atctggtgggaatgtggctctcatgatagggatttgcttattggagctgctaaacatggg
gtgagccgaacagattatcacattcttcgtgatcctgaactctcatttatggcagctcag
aggaactacagtcaaagtaagatggctcattccaggacttctaccccacttttacagcaa
tatcaagttgcactttctgcttcttctcttacctctctacctagactcctagatgctaaa
ggtataattctagaggatatgaaagttaaaagtgaaaaccttaaagaggagcctcagtct
tctgaagaagaatctatgtcttctgaggaaaccaggacactaataaagtctgagcctctc
agtccaaagaatggtgttttaccacaggctactggagatcagaaatctggtggaaaagga
gaaacagacagacgcatggttgcagccagaacagaacccctaactccaaacccatcttct
aagaaacagcgagtccacaaaagagggtcagaatctagttctgattctgactccgattct
gagaggtcatcttgctcttcccggtcatcttcctcctcctcttcctcctcctcttcttgt
tcccactctcgatcaggctctagttcttcatcctcatcttgttcttcagcatcgtcttcc
tcctcctcttcctcctcctcctcatcatcttcttcatcttcgtcagaagagagtgacagt
gaagaagaggaagtccaaaagcgagaaggtacccctcacatgaaagcctatgatgaagaa
agtgttgcctcactgagtactacccaggatgagactcaggatagtttccagatgaacaat
ggtacaccagagtctgcctaccttttacaaggtggatacatgctggcagcgtcatattgg
ccaaaggatcgtgtgatgatcaatcggctggatagtatttgccaaacagttctgaaaggg
aagtggccttcagctagaagaagttatgatgctaatactgtggcctctttctataccaca
aaactgctggacagccctggagcagctacagaatatagcgagcccagtgtccccactccc
tcaggtgcaggtgttaaagaagagcatgatcagtcaccacagatgtcaaaggaaggtggt
ttgaagttgacatttcagaagcaaggacttgcacagaaaagaccacttgatagtgaagat
ggtgctctggggcagcagcagtacctcactcgtcttcgggagcttcagagtgcatctgag
accaacctcgtcaattttccaaaatccccaccagtttcaggtacttccattcaatcagcc
gttggtgccaatggagccatactagacaaccaaccaatagtcaaaaaaagacggggacgg
aggaagaatgtagaaggtgtcgacatcctcttttttaataggaacaaaccacctaatcat
gttactataggcataacagcctcaccaatttctacagggataaacccagctctttcttac
actccaactcaaggaacacctgacatggaaagtccagttccagtcattcaccttaaagat
ggaacaagacttgcaggtgatgatgcaccgaagagaaaggacttggaaaaatggcttaag
gagcacccaggttacgtggaagatttaggagcttttattcctagaatgcagcttcatgaa
gggaggccaaaacaaaaaaggcatcgttgcagaaatcctaataaattggatattaatagt
ctcactggagaagagcgtgttcaactgataaacagaagaaatgctagaaaggttgggggt
gcatttgctcccccattgaaagatctatgtagatttctgaaagaaaattcagaatatgga
gtagctcctgaatggggagaggttgttaaacaatctggatttcttccagaaagtatgtat
gaacgtattcttactggacctgttgtaagagaggaagtaagcaggcgaggaagacggccc
aaaagtgggatttcaaaggttgcagcagcagctgctgctgctgctgcaaatgccacaaat
atatcaggaaatcctttgttagccaatggattacttccaggtgtggatctgacaactctt
caggccttacaacaaaacctacaaaacttgcagtcactgcaagtaactgcaggactgatg
ggaatgcctgccagcctgtctcctggaggagaagctaaaaacatggctgccatgttcccc
atgctgttgtcaggaatggcaggattaccaaatctgttgggtatgggaggactcttgaca
aagcctgcagattctgggacagaagagaagaagggacatgactctaaggagttagaagga
aaaaaggaaaggacagagagccaaactccagagaatggtggagaaaactctgtgtcaagt
tctccttcaacatcctcttctgctgcattaagtacagctgcagctgccaactctttagct
cttaacccactcttactctctaatatactttatccagggatgcttctcactccaggcctt
aatcttcatattccaactttgacccagtctaacacttttgatgtacagaaaaacaaaaac
agtgatttaagctcaactaagtctgcagaagtaaaggaagaagattccagagtcagagat
caggaagacaaagggggaactgaaccaagtcctctgaatgaaaacagcacagatgagggt
tcagagaaagccgatgcttcatctggatctgatagtgcatcctcctcctccgaggattca
gattccagcaatgaagactga
DBGET
integrated database retrieval system
