Echinops telfairi (small Madagascar hedgehog): 101658793
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Entry
101658793 CDS
T08707
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03082
ATP-dependent chromatin remodeling
etf04714
Thermogenesis
etf05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101658793 (ARID1A)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
101658793 (ARID1A)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101658793 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
etf03000
]
101658793 (ARID1A)
03021 Transcription machinery [BR:
etf03021
]
101658793 (ARID1A)
03036 Chromosome and associated proteins [BR:
etf03036
]
101658793 (ARID1A)
Transcription factors [BR:
etf03000
]
Eukaryotic type
Helix-turn-helix
ARID
101658793 (ARID1A)
Transcription machinery [BR:
etf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101658793 (ARID1A)
Chromosome and associated proteins [BR:
etf03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101658793 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
101658793
NCBI-ProteinID:
XP_045154707
LinkDB
All DBs
Position
Unknown
AA seq
1905 aa
AA seq
DB search
MDQMGKMRPQPYGGTNPYSQPQGPPAGPQQGHGYPGQPYGSQTPQRYPMAMQGRAQSTMG
GLSYAQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQPPYSQQPPSQTPHAQPSYQQQQ
QSQPPQLSASQPAYSQQPSQPPHQQSPTPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQ
PQQPASSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQELSQDSFGSQASSAPSMTSSKGG
QEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPH
TSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSIMHPSMNQS
SIAQDRGYMQRNPQMPQYSSPQPGSALSPRQPSGGQMHTGMGSYQQNSMGSYGPQGAQYG
PQGGYPRQPNYNALPNANYPSAGMAGSMNPMGAGGQMHGQPGIPPYGTLPPGRMSHASMG
NRPYGPNMANMPPQVGSGMCPPPGGMNRKTQETAVAMHVAANSIQNRPPGYPNVNQGGMM
GTGTPYGQGINSMAGMINPQGPPYPMGGTMTNNSAGMATSPEMMGLGDVKLTPATKMNNK
ADGTPKTESKSKKSSSSTTTNEKITKLYELGGEPERKMWVDRYLAFTEEKAMGMTNLPAV
GRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFE
CKIERGEDPPPDIFAAADSKKSQPKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPT
PASTPHSQIPPLPGMRSNSVGIQDAFPDGSDPTFQKRNSMTPNPGYQPSMNTSDMMGRMS
YEPNKDPYGSMRKAPGSDPFMSSGQGPNGGMGDPYSRAAGPGLGNVAMGPRQHYPYGGPY
DRVRTEPGIGPEGNMGTGAPQPNLMPSNPDSGMYSPSRYPPQQQQQQQQQQQQQQRHDSY
GNQFSSQGTPSGSPFPSQQTTMYQQQQQNYKRPMDGTYGPPAKRHEGEMYSVPYSTGQGQ
PQQQQLPPAQPQPASQQQTAQPSPQQDVYNQYGNAYPAAAAAATERRPAGGPQNQFPFQF
GRDRVSAPPGSNAQQNMPPQMMGGPIQASSEVAQQGTMWQGRNDMTYNYANRQSSASAPQ
GPAYHGVNRTDEMLHTDQRANHEGPWPSHGTRQPPYGPSAPVPPMTRPPPSNYQPPPSMQ
NHIPQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGPPVPASHIAPAPVQPPMIRRDI
TFPPGSVEATQPVLKQRRRLTMKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDN
SIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRTLLDPGRFNKASSPAPV
EGEEEEDLLGPKLEEEEEEEVVENDEEMAFSGKDKPPSENSEEKLISKFDKLPVKVVQKN
DLFVVDCSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTHFESKTELLPTRPHVPCPPAPQK
HVTASEGMPGTTEQEGPPPDGPPEKRITATMDDMLSTRSSTLAEEGSKSAEASKESSKFP
FGINPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCVCVSNTIRSLSFVPGNDFE
MSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKVEWWWDCLEMLRENT
LVTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQDPFSTLGPNAVLSPQRLVLE
ALSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCREMAVVLLANLAQGDSL
AARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHMQNPPFEPTSVDMMRRAARALLA
LAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQS
NT seq
5718 nt
NT seq
+upstream
nt +downstream
nt
atggatcagatgggcaagatgagacctcagccatatggtgggactaacccatactcgcaa
ccacagggacctccggcaggaccgcagcaaggacatgggtatccagggcagccatatggg
tcccagaccccgcagcggtacccgatggccatgcagggccgggcgcagagtaccatgggc
ggcctctcttatgcacagcagattcctccttatggacagcaaggccctagcgggtatggc
caacagggccagactccgtactacaaccagcaaagtcctcacccccagcagcagccaccc
tactcccagcaaccaccctcccagacccctcatgctcaaccttcatatcagcagcagcaa
cagtctcagccaccacagctctcagcctcgcagcctgcgtactcccaacagccttcccag
cctccacatcagcagtctccaactccatacccttcccagcagtccacaacacagcaacac
ccacagagccagcccccctactcgcaaccacaggcacagtctccctaccagcagcagcaa
cctcagcagccagcctcctcgacgctctcccagcaggctgcgtaccctcagccccagtcg
cagcagtcacagcaaactgcctactcccagcagcgcttccctccaccccaggagttatct
caagattcatttgggtctcaggcatcctcagccccctcaatgacctccagtaagggaggg
caagaagatatgaacttgagccttcagtcaagaccctcgagcttacctgatctgtctggt
tcaatagacgatctccccatggggacagaaggagctctgagccctggagtgagcacatca
gggatttccagcagccaaggagagcagagtaatccagctcagtctcctttctctcctcat
acctcccctcacctgcctggcatccgaggcccctccccgtcccctgttggctctcccgcc
agtgttgctcagtctcgctcaggaccactctcgcctgctgcagtgccaggtaaccagatg
ccacctcggccgcccagtggccagtcagacagcatcatgcatccttccatgaaccaatca
agcattgcccaagatagaggttacatgcagaggaacccccagatgccccagtacagttcc
cctcagcccggctcagccttatctcctcgtcagccttctggaggacagatgcacacaggc
atgggctcttaccagcagaactccatggggagctatggtccccagggggctcagtatggc
ccacaaggaggctacccaaggcagccaaattataatgctttgcccaatgccaactacccc
agtgctggcatggctggaagcatgaaccctatgggtgctggaggtcaaatgcatgggcag
cctggcatcccaccttacggcaccctccctccggggagaatgagtcatgcttccatgggc
aaccggccttatggccccaatatggccaatatgccacctcaggttgggtcagggatgtgc
cccccaccagggggcatgaatcgaaaaactcaagaaactgctgttgccatgcatgttgct
gccaactctatccaaaacaggcctccaggctaccccaatgtgaatcaggggggtatgatg
ggaactggaactccttatggacaagggattaatagtatggctggcatgatcaaccctcag
ggaccgccatatcccatgggtgggaccatgaccaacaattcagcagggatggcaaccagt
ccagagatgatgggccttggcgacgtaaagttaactccagccaccaaaatgaacaacaag
gcagatgggacgcccaagacagagtccaaatccaagaaatccagttcctctactacaacc
aatgagaagatcaccaagttgtatgagctgggtggtgagcccgagaggaagatgtgggtg
gaccgttacctggccttcacagaagagaaggccatgggcatgacaaatctgcctgctgtg
ggcaggaagcctctggacctctatcgcctctatgtgtctgtgaaggagattggtggattg
actcaggtcaacaagaacaaaaaatggcgggaacttgcaaccaacctcaatgtaggcacc
tcaagcagtgctgccagctccttgaaaaagcagtatatccagtgtctctatgcctttgag
tgcaagattgagcggggagaagatcctcccccagacatctttgcagctgctgattccaag
aagtctcagcccaagatccagcctccctctcctgcggggtcggggtctatgcaggggcca
cagactcctcagtccaccagcagttcgatggcagaaggaggtgacctgaagccaccaact
ccagcatccacaccgcacagccagatccctcccttgccgggcatgaggagtaattcagtc
gggatccaggatgcctttcctgatggaagtgaccccacattccagaagcggaattccatg
actccaaaccctgggtaccaacccagtatgaatacctctgacatgatgggacgcatgtcc
tacgagccaaataaggatccttatggcagcatgaggaaagctccagggagtgaccccttc
atgtcctcggggcagggccccaatggtggaatgggggacccttacagccgtgctgctggc
cctggactggggaatgtggccatgggaccacgacagcactacccatacggaggtccttat
gaccgagtgaggacggaacctgggataggacctgagggaaacatgggcactggggcccca
caaccaaatctcatgccttccaacccagattcggggatgtattctcctagtcgctatccc
ccacagcagcagcagcaacagcaacagcagcagcagcagcagcaacgacatgattcctat
ggcaatcagttctccagccaaggcaccccttctggtagccccttccccagccaacagacc
acaatgtatcagcagcagcagcagaattataagcgaccgatggatggcacatatggccct
cctgccaaacggcacgaaggagagatgtacagtgtgccctacagcacagggcagggtcag
ccgcagcaacagcagttgcccccagcgcagccccagcctgccagccagcaacaaactgct
cagccttcccctcagcaggatgtgtacaaccagtatggcaatgcctatcctgccgctgct
gccgctgctacagagcgccgaccagcaggcggcccccagaaccaatttccattccaattt
ggccgagaccgtgtctctgcaccccctggctccaatgcccagcagaacatgccaccacaa
atgatgggtggccccatacaggcatcatctgaggttgctcagcaaggcaccatgtggcag
gggcgcaatgacatgacctacaattatgccaacaggcagagctcagcctctgccccccag
ggtcccgcctatcatggtgtaaaccgaacagatgaaatgctgcacacggatcagagggcc
aatcatgaaggtccatggccctcccatggcacacgccagcctccatatggtccctctgcc
cccgtgcctcctatgacaagaccccctccatctaactaccagcccccaccaagcatgcag
aatcacattcctcaggtatccagccctgctcccttgcctcggccaatggagaaccgcacc
tctcctagtaagtctccgttcctgcactctgggatgaaaatgcagaaggcaggcccacca
gtacctgcttcgcacatagcgcctgcccctgtgcagccccccatgattcggcgggatatt
accttcccacctggctctgtcgaagccacacagcctgtgttgaagcagaggaggaggctc
acaatgaaagacattggaactccggaggcatggcgggtaatgatgtcactcaagtctggg
ctgctggcagagagcacgtgggcattagataccattaacatcctgctgtatgatgataat
agcatcatgaccttcaacctcagtcagctcccagggttgttggagctccttgtggaatat
ttccgacgttgcctgatcgagatctttggcattttaaaggagtatgaggtgggtgaccca
ggacagagaacattactagaccctgggagattcaataaggcctctagtccagcgcctgtg
gaaggggaggaggaagaagacctcttgggtcctaaactggaggaggaagaagaggaggag
gtagttgaaaatgatgaggagatggccttttcaggcaaggacaagcccccctcagagaac
agcgaggagaagctgatcagtaagtttgacaagctgccagtgaaggtcgtgcagaagaac
gacctgtttgtggtggactgctcagataagcttgggcgcgtgcaggagtttgacagtggc
ctgctacactggcggattggtgggggggacaccactgaacatattcagacccactttgaa
agcaagacagagctgctgcctacccggcctcatgtgccctgccctccagccccccagaaa
catgtcacagcatcagagggtatgccagggacaacagagcaggagggtcccccgcctgat
ggccctccagaaaagcggatcacagccacaatggatgatatgttgtccactcggtcgagc
acattggccgaggaggggtccaagagtgcggaggcctccaaggagagcagcaagttccca
tttggcatcaacccagcacagagccaccggaacatcaaaattctagaggacgaaccccac
agtaaagatgagaccccactgtgcacccttctggactggcaggattccctggccaagcgc
tgcgtctgtgtgtccaacaccatccgaagcctgtcatttgtgccaggcaacgactttgag
atgtccaagcacccggggctgctgctgatcctgggcaagctgatcctgctgcaccacaag
cacccggaacggaagcaggcaccgttaacttacgagaaggaggaggagcaggaccaaggg
gtgagctgcaacaaggtggagtggtggtgggactgcttggagatgctccgggaaaacacc
ttggtcaccctcgccaacatttcgggccagttggacctctccccgtaccccgagagcatc
tgtctgcctgtcctggatggacttctacactgggcggtctgcccctcagctgaagcccag
gaccccttctctaccttgggccccaacgccgtcctctccccccagagactggtcttggaa
gctctcagcaaactcagcatccaggacaacaatgtggacctgattctggccacacccccc
ttcagccgactggagaagttgtatagcaccatggtgcgcttccttagtgaccgaaagaac
ccggtatgccgggagatggctgtggtactgctggctaacctggcgcagggcgacagtctg
gcagcccgcgccatcgccgtacagaagggcagcatcggcaacctcctgggcttcctagag
gacagtcttgctgccacgcagttccagcaaagccaggccagtctcctccacatgcagaac
ccgccttttgagccaaccagtgtggacatgatgcggcgggcggcccgcgcgttgcttgcc
ctggccaaggtggacgagaaccattcagagttcactctgtacgagtcgcggctgttggac
atctcggtatcgccgttgatgaactccttggtttcacaagtcatttgtgatgtactgttt
ttgattggccagtcatga
DBGET
integrated database retrieval system
