Echinops telfairi (small Madagascar hedgehog): 101658931
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Entry
101658931 CDS
T08707
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf04140
Autophagy - animal
etf04211
Longevity regulating pathway
etf05010
Alzheimer disease
etf05014
Amyotrophic lateral sclerosis
etf05016
Huntington disease
etf05017
Spinocerebellar ataxia
etf05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101658931 (RB1CC1)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
101658931 (RB1CC1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
101658931 (RB1CC1)
05014 Amyotrophic lateral sclerosis
101658931 (RB1CC1)
05016 Huntington disease
101658931 (RB1CC1)
05017 Spinocerebellar ataxia
101658931 (RB1CC1)
05022 Pathways of neurodegeneration - multiple diseases
101658931 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
etf01009
]
101658931 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
etf04131
]
101658931 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
etf03029
]
101658931 (RB1CC1)
Protein phosphatases and associated proteins [BR:
etf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101658931 (RB1CC1)
Membrane trafficking [BR:
etf04131
]
Autophagy
Autophagosome formation proteins
ULK complex
101658931 (RB1CC1)
Mitochondrial biogenesis [BR:
etf03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
101658931 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Jag_N
Motif
Other DBs
NCBI-GeneID:
101658931
NCBI-ProteinID:
XP_004697609
LinkDB
All DBs
Position
Unknown
AA seq
1592 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIQNKYKIAIQHQVLVVNGGECMAADRRVC
TYSAGTDTNPIFLFNKEMFLCERPPAIPKTTFSTENDMALKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTNSYQKLLFKFESIYSSYLQ
SIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLDSLTEHEGSEKAEMKRSSEL
VLSSDMPRTTSKSLLTSFHTPMDHVASDITDSESGKEIRDSCQSTVHHDDISVDTKDSEL
PFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIRPFLAECHQTIGTLDNQSMKT
IKGLEDRLYALDQMIASCGRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLM
IMLQNHKKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELIE
RVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKQLYEAEKSKRESFGKL
FRKSFLRNRLFRGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPL
LCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLSEQKTSTSQASPQSASSPRIESATG
ITTTTSPRTPPPLPVQDPLCPAVCPLEELSPDSIDAHTFDFETIPHPNVEQTLGQGSLDL
DSLAESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTN
ICVKEDSGDHVSCVQLEKCRVVAQDSHYSIQTIKEDLCHLRTFVQKERCDFSNSFKCTAE
EIGNIIGKVKCSLEITLQEKHQKELHTLKNEYEAKLDVLMKESEENENKIKKLKGDLVCL
EEVLQNKDNEFALVKHEKEAVICLQNEKDQKLLDMENKMHTQNREINELKESREIVLGDL
KKLHVENDEKIELLRTELQSLEKSHLKELEDTLQVKHTHEFEKVKTEHKASLEKLKEENQ
QRLDQIQESHTTLVQEKEQQLQELKLKVSDLSDMRCKLEVELALKEAETDEIKLMLEESK
ALHKETLKSFLEQETENLRLEISNLNQKIQENNDNYQVGLAELRTLMTIEKDQCISELIG
RHEEESNMLKAELNKLTSLYHQACEIETNLKDQIVELQNKLESELRTLEKQKDEKMTQQE
EKYEAIVHKLEKDKEKLVMNRDQDREQLIHKLNYEKEEAIQTALNEFKMGRDAVEKELLE
KVQHLETQLAKSPATDSTREESSSLVSELQEKLEEEKAKFLEQLEEQEKKKNEEMQNVRT
SLIAEQQTNFNTVLTREKMKKENIINDLSDKLKSTIQQQERDKDLIESLSEDRARLLEEK
KKLEEEVSKLRGSSFVPSAYVVAAPELYGACAPELPGEMERSTMETAEDGRVDSAMDTSM
MSVQENVHLLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDFQ
VGDLVLIILDERHDNYVLFTVSPTLYFLHSESLPGLDLKPGEGASGGSRRPWVLGKVMEK
EYCQAKKAQNRFKVPLGTKFYRVKAVSWNKKV
NT seq
4779 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatatgtatttctggtcaatactggaactacactaacatttgacactgaactt
acagtgcaaactgtggcagaccttaagcatgccattcaaaataaatacaagattgctatt
cagcaccaggtgcttgtggtcaatggaggagaatgcatggctgcagatcgaagagtatgc
acctatagtgctgggacggacacaaatccaatttttctttttaataaagaaatgttttta
tgtgaacgtcctccggctattcctaaaactaccttttcaacagaaaatgatatggcattg
aaagttgaagagtctcttatgatgcctgcagtttttcacactgtagcttcaaggacacaa
cttgccgtggagatgtatgaagttgccaagaaactttgttctttttgtgaaggtctggtt
cacgatgaacatcttcaacaccaaggatgggctgctatcatggccaatttggaagactgt
acaaattcataccaaaagctccttttcaagtttgaaagtatttattcaagttatctgcaa
tccatagaagacatcaagttaaaacttactcatttaggaacagcagtttcagtaatggcc
aagattccactgttggagtgcctaaccagacatagttacagggaatgtttgggaagattg
gattctttaactgaacatgaaggctcagaaaaggctgagatgaaaagatccagtgaactg
gtgctttcttctgatatgcctcgaacaactagcaaatcattgttaacctcatttcatacg
ccaatggatcatgttgcatcagatattaccgattctgaaagtggcaaagaaattagggac
tcctgtcagagtactgtccatcatgatgacatttcagtagatacgaaagacagtgagcta
ccttttttcaatgtttctttattagactggataaatgttcaagatcgacctaatgatgtg
gaatctttggtcaggaagtgctttgattctatgagcagacttgatccaaggattattcgg
ccatttctagcagaatgccatcaaactattggcacacttgataatcagagtatgaaaacc
attaaagggcttgaagataggctttatgccttggaccagatgattgctagctgtggcaga
ctggtgaatgaacaaaaagaacttgctcagggatttttagcgaatcagatgagagctgaa
aacttgaaggatgcatctgtgttgcctgatttatgcctgagtcatgcaaatcagttgatg
attatgttgcaaaaccataaaaaactattggatattaaacaaaagtgtaccactgccaaa
caagaacttgcaaataacctacatgttagattgaagtggtgttgctttgtaatgcttcat
gctgatcaagatggggagaagttacaagctttgcttcgccttgtaatagagttgatagaa
agagtcaagattgttgaagctcttagtacagttcctcagatgtactgcttagctgttgtg
gaggttgtcagaagaaaaatgttcataaaacactacagggagtgggctggtgctttagtc
aaagatggaaaacaattatatgaagctgaaaaatcaaaaagagaatcctttgggaaatta
ttcaggaagtctttcttaagaaatcgtctctttcggggactggactcctggcctccttcc
ttttgtactcaaaagcctcgaaagtttgattgtgaacttccagatatttcattaaaagat
ttacagtttctccaatcattttgcccttcagaagttcagccattcctcagggtacctcta
ctttgtgactttgaacctctacaccagcatgttcttgctctccataatttggtaaaagca
gcacaaagtttggatgaaatgtcacagaccattacagaccttcttagtgaacaaaagacc
tctacaagtcaggcatccccacagtctgcttcttcaccaaggatagaaagcgcaacagga
attacaactactacctcaccaagaacacctcctccactacctgttcaggatcccttatgt
cctgcagtatgtccattagaagaattatctcctgatagcattgatgcccatacatttgat
tttgaaaccatcccccatccaaacgtagaacaaactcttggccaagggtctttagacttg
gattcattagcagaaagtcctgaatctgattttatgtctgctgtgaatgagtttgtaata
gaagaaaatttatcctctcctaatccgataagtgatccacaaagcccagaaatgatggtg
gaatcactttattcatcagttatcaatgcaatagatagcaggcgtatgcaggatacaaat
atttgtgttaaagaggattcaggagaccatgtttcctgtgtccaattggaaaaatgtaga
gttgttgcccaagactctcactacagcatacaaactatcaaagaagacctttgccactta
agaacatttgttcaaaaagaacggtgtgacttctcaaattctttcaaatgcacagcagaa
gaaataggaaacattattgggaaagtaaagtgttcgctcgaaataacactacaagaaaaa
catcaaaaagaacttcatactttaaaaaacgaatatgaagctaagcttgatgtgctaatg
aaggagagtgaagaaaatgagaacaaaattaagaaattgaaaggagacctagtatgtctt
gaggaggtattgcaaaataaagataatgaatttgcattggttaaacatgaaaaagaagct
gtcatctgcttgcagaacgaaaaggaccagaagttgttagatatggaaaataaaatgcac
acacaaaatcgtgaaattaatgaactgaaagagtctcgcgaaatagtgcttggagactta
aagaagctccatgttgaaaatgatgagaagatagagttattgagaacagaacttcaaagt
ctagagaaaagtcatctgaaggaattagaggacactctgcaagtcaaacacacacacgag
tttgagaaagttaagacagagcacaaggcgtctttggaaaaattaaaagaggaaaatcaa
caaagacttgaccagatacaggagtcgcacacaacacttgtccaggagaaagaacaacag
ctacaggaattaaagctcaaggtttctgatttgtctgacatgagatgcaagctggaagtt
gaacttgctttgaaggaagctgaaactgatgaaataaaacttatgctggaagaaagcaaa
gccctgcacaaggagaccttaaaatctttccttgaacaagagacagaaaatttgagacta
gagataagtaacttaaaccaaaagattcaagaaaataatgataattatcaagtaggttta
gcagagctaagaactttaatgacaattgaaaaggatcagtgtatttcagagttaattggt
agacatgaagaggaatcaaatatgcttaaagctgaattaaacaaattaacatctttgtac
caccaagcatgtgaaatagaaacaaatctgaaagatcaaatagttgaactacaaaataaa
ttggaatcagaattgcgtactcttgaaaagcaaaaagatgaaaaaatgacccaacaagaa
gaaaaatatgaagctattgtccataaacttgagaaagacaaagaaaaattggtcatgaat
cgggatcaagacagagaacagttaattcataagcttaattatgaaaaagaagaggccatt
caaactgctcttaacgaatttaaaatggggagagatgcggttgagaaagaattactagaa
aaagttcaacaccttgagactcaattagcaaaaagtcctgccactgactctacaagagaa
gagtcttcaagtttagtttctgaacttcaagaaaaacttgaggaagaaaaagctaaattt
ctagaacaacttgaagaacaagagaaaaaaaagaatgaagaaatgcaaaatgttcgaaca
tctttgattgctgaacaacagacaaattttaatactgttttaacaagagagaaaatgaaa
aaagaaaacataataaatgacctaagtgataagttgaaaagtacaatacagcaacaagag
cgagataaagatttaatagagtcactctctgaagatcgagctcgattgcttgaagaaaag
aaaaagcttgaagaagaagtgagtaagttgcgtgggagcagctttgttccttcagcttac
gtagttgcagccccagaactttatggggcttgtgcccctgaactccctggtgaaatggag
agatccacgatggaaacagctgaggatgggagagtggattcagcaatggacacaagcatg
atgtctgtacaagaaaatgtccatttgctgtctgaagaaaaacagaggataatgctgtta
gaacggacattgcagttgaaagaagaagaaaataagcgattaaatcaaagacttatgtca
cagagcatgtcttcagtatcttcaaggcattctgaaaaaatagctattcgagattttcag
gtgggagatttggtgctcatcatcctagatgaacgccacgacaattatgtgttatttacc
gttagtcccactttgtacttcctgcattcagagtctctgcctggcctggatctcaaacca
ggtgagggtgcttcaggtggatctagaagaccctgggtacttggaaaagtaatggaaaag
gaatactgtcaggccaagaaggcacaaaaccgatttaaagttcctttggggacaaagttt
tatagagtgaaagcagtgtcctggaataagaaagtataa
DBGET
integrated database retrieval system
