Echinops telfairi (small Madagascar hedgehog): 101660042
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Entry
101660042 CDS
T08707
Symbol
SMARCAD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
101660042 (SMARCAD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
etf03036
]
101660042 (SMARCAD1)
Chromosome and associated proteins [BR:
etf03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
101660042 (SMARCAD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
CUE
Motif
Other DBs
NCBI-GeneID:
101660042
NCBI-ProteinID:
XP_004703322
UniProt:
A0ABM0IMA3
LinkDB
All DBs
Position
Unknown
AA seq
1024 aa
AA seq
DB search
MSLFNLDRFRFEKRGKIEEAPEATPPPPQAGPSSPISLSAEEENADGEVSRPGTPDSDIT
EKTEDSSVPETPENERKSSVSYFTNQRGIQYIDLSSDSEDVAPNCSSPVQEKTFSKDTVI
IVSEPSEDEDSQGHPTFTGRNANSGLDDFSELEDIKDAKLQTLKELFPQRSDTDLLKLIE
STSTMDGAIAAALLMFGDAGGGPRKRKISSSSEPYEDDEFNDDQSVKKKKVDQEEEANES
AESSNNWEKQESIVLKLQKEFPNFDKRELREVLKEHEWMYTEALESLKVFAEDQDIHFAS
QNEVPNGKEVSSRNQNCPKNATKTKLKQKFSMKAQNGFNKKRKKNVFNPKRVTDDSEYDS
GSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCSQKKAQKITELRPFN
SWEALFTKMSKTNGLSEDLIWNCKTLIQERDVVIRLMNKCEDISNKLTKQVTMLTGNGGG
WNIEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQE
GNKGPHLIVVPASTIDNWLREVNLWCSTLNVLCYYGSQEERKQIRYNIHSRYEEYNVIVT
TYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQN
NLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAHAKQIIKPFILRR
VKEEVLKQLPPKKDQIELCAMSEKQEQLYLGLFNRLKKSINNLEKNTEMCNVMMQLRKMA
NHPLLHRQYFTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYRHINN
FQLDMDLILDSGKFRVLGCILSELKQKGNRVVLFSQFTMMLDILEVLLKHHQHRYLRLDG
KTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDR
CHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEGDEGSMPADIATLLKT
SMGL
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttttcaacctggaccgttttcgttttgagaaaaggggtaagattgaggaggcc
cccgaagcaaccccaccaccaccccaggctggcccttcttctcccatttctcttagtgct
gaagaggagaatgctgatggggaagttagcaggccaggcactccagattcagatataact
gaaaaaacagaagattctagtgttccagagactccagaaaatgaaagaaaatcaagtgtg
tcatatttcacaaatcaaagaggaatacagtatattgatttatcttctgacagtgaagat
gttgccccaaattgctccagtccagttcaagagaagacattcagcaaagatacagtgatt
attgtttctgagccttctgaagatgaagattctcaaggccatcctaccttcacaggtaga
aatgctaattctggattggatgacttttcagaactagaagacattaaagatgctaaactt
cagactttgaaggaacttttcccacaaagaagtgacaccgatttacttaagttgattgaa
tcaacaagcaccatggatggagcaattgctgctgccttgctgatgtttggtgatgcaggt
ggtggacccaggaaaagaaaaatatcttcctcttcagagccatatgaggatgatgaattt
aacgatgatcaatctgtgaaaaagaaaaaagtggatcaggaagaagaagcaaatgagtct
gcagaatctagcaataattgggaaaagcaggaaagtattgtactgaaattacaaaaggaa
tttccaaattttgacaaacgggaactccgagaagtacttaaggaacatgaatggatgtac
actgaagctttagaatctttaaaagtgtttgcagaagaccaagatatacactttgcttca
caaaatgaggtcccaaatggaaaagaagtttcctcaaggaatcagaattgccctaaaaat
gcaactaaaacaaaactgaagcagaaattttccatgaaagcacaaaatgggttcaacaag
aaacgtaaaaaaaatgtattcaatcctaagagagttactgatgactctgaatatgattca
ggttctgatgttggtagttctcttgatgaggactatagtagtggtgaagaagtgatggag
gatggttataaaggcaaaattcttcatttccttcaagatgcctcaattggtgaacttact
ttgattcctcagtgttctcagaaaaaggctcagaagataacagaactccggccctttaat
agttgggaagctctgttcacaaagatgtccaaaacgaatggcttatccgaagacttgata
tggaactgtaaaacattgatccaagagagggatgtagttataaggctcatgaataaatgt
gaagatatttcaaataaattgacaaagcaagttaccatgctcactggaaatggaggtgga
tggaacatagaacaaccctccattctaaaccaaagtttgtcactcaagccgtatcagaag
gttggtttgaattggttggcgttggtacataaacatggacttaatggcattttggctgat
gaaatgggtctaggaaaaactattcaagctattgcattcctggcatacctttatcaggag
ggtaacaaaggtccacatttgatcgttgttccagcatcaactatagataactggttaagg
gaagttaatctttggtgctccactttaaacgtgctttgttactatggctctcaagaagaa
cgtaaacaaattagatacaatattcatagtcgatatgaagagtataatgtaattgtgacc
acgtataactgtgcaatcagcagttccgatgaccgtagtctctttcgacggctgaaactc
aattatgcaatttttgatgagggccatatgctgaaaaacatgggctcaatccgctaccag
caccttatgacaattaatgcaaacaaccgtttgctgctcacaggcacacctgtacagaat
aatttgttagaactcatgtctctgttgaatttcgttatgccacacatgttcagtagcagc
accagtgaaatacgaagaatgttttcttctaagacaaaatcagcagatgagcaaagtata
tatgaaaaggagagaatagcacacgcaaaacaaatcataaagccatttattctcagaaga
gtaaaagaagaggttctgaagcagctacctcccaaaaaagatcaaattgaattgtgtgca
atgtcagagaagcaggaacagctctatctgggtcttttcaacagattgaagaaatctatc
aataatctagaaaaaaacacagaaatgtgcaatgtcatgatgcaactgagaaaaatggcc
aatcatcctttattgcaccgccagtatttcacagcagaaaaactcaaggaaatgtctcag
cttatgctaaaggaacctacgcattgtgaggctaaccctgacctgatctttgaagatatg
gaagttatgacagactttgagctacatgtactttgtaaacagtatcgacacattaataac
tttcagctagacatggatttaattttagattctggaaaattccgagttttaggatgcatc
ttgtctgaattgaagcagaagggtaatagagttgtattatttagccagttcaccatgatg
ctggatatcttagaggttctcttaaaacaccaccagcataggtatctcagattagatggc
aagacgcagatttctgaaaggattcatctaattgatgagtttaacaccgatatggatatc
tttgtatttctactatcaacaaaagctggtggactaggaataaatctgacttcagcaaat
gttgttatacttcatgatatcgattgtaatccttacaatgacaagcaagcggaagataga
tgccatagagtaggccagactaaggaagtactagttataaaattaataagccaaggaacg
attgaagaatcgatgttgaaaattaaccaacaaaaattaaagctagaacaagatatgacc
acagtagatgaaggtgatgaaggaagtatgccagcagatatagccacattattaaaaact
tcaatgggcctgtaa
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