Echinops telfairi (small Madagascar hedgehog): 101660069
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Entry
101660069 CDS
T08707
Symbol
LRRC4C
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf04360
Axon guidance
etf04514
Cell adhesion molecule (CAM) interaction
etf04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
101660069 (LRRC4C)
04517 IgSF CAM signaling
101660069 (LRRC4C)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
101660069 (LRRC4C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
etf04515
]
101660069 (LRRC4C)
Cell adhesion molecules [BR:
etf04515
]
Immunoglobulin superfamily
NGL family
101660069 (LRRC4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
LRR_1
V-set
LRR_14
LRR_9
Ig_2
LRRNT
Ig_6
LRR_LRWD1
Sp38
Herpes_gE_N
Syndecan
Motif
Other DBs
NCBI-GeneID:
101660069
NCBI-ProteinID:
XP_004708362
UniProt:
A0ABM0IUX9
LinkDB
All DBs
Position
Unknown
AA seq
640 aa
AA seq
DB search
MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
ICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDLG
ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQ
GLMHLQKLWMIQSQIQAIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHH
NPWNCNCDILWLSWWIKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPP
ADLNVTEGMAAELKCRASTSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQD
TGMYTCMVSNSVGNTTASATLNVTAAATTPFSYFSTVTVETMEPSQDEARTTDNNVGPTP
LIDWDTTNVTTSLTPQSTRSTEKTFTIPVTDINNGIPGIDEVMKTTKIIIGCFVAITLMA
AVMLVIFYKMRKQHHRQSHHAPTRTVEIINVDDEITGDAPMESHLPMPAIEHEHLNHYNS
YKSPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgaccttacatccacagcagataatgataggtcctaggtttaacagg
gccttatttgaccccctgcttgtggtgctgctggctctccaacttcttgtggtggctggg
ttggtgcgggcccaaacctgcccttccgtctgctcctgcagcaaccagttcagtaaggtg
atctgtgttcggaaaaacctgcgcgaggttccagatggcatctcgaccaacactcggctg
ctgaacctccacgagaaccaaatccagatcatcaaagtgaacagcttcaagcacttgagg
cacctggaaatcctacagctgagtaggaaccacatcagaaccattgaaattggggccttc
aatggtctggcgaacctcaacactctggaactctttgacaatcgtctgacgaccatcccg
aatggcgcttttgtatatttgtctaaactgaaggagctctggttgcgcaacaaccccatt
gagagtatcccttcttatgcttttaacagagtcccttctttgcgccggctggacttgggg
gaattgaaaaggctttcatacatctcagaaggtgcctttgaaggtctatccaatttgagg
tatttgaaccttgccatgtgcaatctccgggaaatccctaacctcaccccacttatcaaa
ctggatgagttggatctttctgggaatcacttgtctgccatcaggcctggctcttttcag
gggttgatgcaccttcaaaaactgtggatgatacaatcccagattcaagcgattgaaagg
aatgcctttgataacttgcagtcgctggtggagatcaacctggcacacaacaatctaaca
ttgctgcctcatgacctcttcacgcccttgcatcacttagagcggatccacttacatcac
aatccttggaattgtaactgtgatatcctttggctcagctggtggatcaaagacatggcc
ccctccaacacagcttgttgtgccaggtgtaacacccctcccaatctcaaagggaggtac
atcggagagctcgaccagaattatttcacctgctatgctcctgtgattgtggagccccca
gcagacctcaacgtcacggaaggcatggcagccgagctgaaatgccgggcctccacgtct
ctgacctcggtgtcttggatcactcccaatggaaccgtcatgacccacggggcttacaaa
gtgaggatagctgtgctcagcgacggcacgttaaatttcacgaatgtaaccgtgcaagat
acaggcatgtacacgtgcatggtgagtaattccgttggaaataccaccgcttcagcaacc
ctgaatgtcactgcagccgccactactcccttctcgtacttttccaccgttaccgtcgag
accatggaaccttctcaggatgaagctcggaccacagataacaacgtgggccccactcca
ctgatcgactgggacactaccaatgtgaccacctctctcacgccccagagcacaaggtca
acggaaaagacattcactatcccagtgactgatatcaacaacgggatcccaggaattgat
gaggtcatgaagactaccaaaatcatcattggctgtttcgtggccatcacgctgatggct
gcagtaatgctggtcattttctacaagatgaggaagcagcatcatcggcaaagccatcac
gcccccacccggactgttgaaataattaatgtggacgatgagattaccggggacgcaccc
atggaaagccacctgcccatgcctgctattgagcatgagcacctcaatcactataactct
tacaaatctcccttcaaccacacaacaacagttaacacaatcaattcaatacacagttca
gtgcatgaaccgttattgattcgaatgaactctaaagacaatgtacaagagactcaaatc
taa
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