Echinops telfairi (small Madagascar hedgehog): 101660294
Help
Entry
101660294 CDS
T08707
Symbol
EXOSC2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101660294 (EXOSC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etf03019
]
101660294 (EXOSC2)
Messenger RNA biogenesis [BR:
etf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
101660294 (EXOSC2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
101660294 (EXOSC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP4
KH_6
ECR1_N
RRP40_S1
ECR1_N_2
EXOSC1
Motif
Other DBs
NCBI-GeneID:
101660294
NCBI-ProteinID:
XP_004713309
UniProt:
A0ABM0J2E7
LinkDB
All DBs
Position
Unknown
AA seq
293 aa
AA seq
DB search
MAMEMRLPVARKPFSESLGRETKKHLVVPGDTITTDTGFMRGHGTYMGEEKLIASVAGSV
ERVNKLICVKALNTRYNGEVGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNLPGGEL
RRRSAEDELAMRGFLQEGDLISAEVQAVFSDGAVSLHTRSLKYGKLGQGVLVQVSPSLVK
RQKTHFHDLPCGASVILGNNGFIWIYPTPEHKEEEAGGFTANLEPVSLADREVISRLRNC
IVSMVTQRMMLYDTSILYCYEVSLPHQIKDILKPEIMEEIVMETRQRLLEQEG
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggagatgaggcttcccgtggctcgtaagccctttagcgagagcttgggtcgc
gagacgaagaaacacctggtggtgccgggcgacaccatcacgaccgacacgggcttcatg
cggggccatgggacctatatgggggaggagaagctcattgcatcggtggccggctctgtg
gagagagtgaacaagctgatctgtgtgaaagcgctgaataccaggtataacggtgaagtg
ggagacattgtcgtggggagaatcacagaggttcaacagaagaggtggaaggtggagacc
aactccagactggactcagtcttgcttctctcgtccatgaaccttcccggaggagagctg
aggcggcgatctgcagaagatgagcttgcaatgagaggtttcttgcaggaaggggacctc
atcagtgctgaggtacaggccgtgttctccgacggagccgtttccctgcacacgaggagt
ctgaagtacggcaaactaggccagggagttttggtccaggtgtccccctccctcgtcaaa
cggcagaagactcatttccatgacttgccgtgcggtgcctcagtgattctggggaacaac
ggcttcatctggatctatccgacgcctgagcacaaagaggaggaggccgggggcttcact
gccaacttggagcctgtgtcccttgctgatcgagaggtgatatctcggcttcggaactgc
attgtctccatggtaactcagaggatgatgctgtatgataccagcatcctgtactgctat
gaagtgtcccttccacatcagatcaaagatatattaaagccagaaatcatggaagaaatt
gtgatggaaacgcgccagaggctgctagaacaagaaggatga
DBGET
integrated database retrieval system
