Echinops telfairi (small Madagascar hedgehog): 101661284
Help
Entry
101661284 CDS
T08707
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain
KO
K16617
collagen type XIII alpha
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
101661284 (COL13A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
etf00536
]
101661284 (COL13A1)
Glycosaminoglycan binding proteins [BR:
etf00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101661284 (COL13A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
101661284
NCBI-ProteinID:
XP_045147241
LinkDB
All DBs
Position
Unknown
AA seq
565 aa
AA seq
DB search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NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgcctggacgtgtgggagtcaagggccaaacaggcgagaagggctccccgggagatgct
gggttgtccatcattggtccgagaggcccccctggccagccaggcactcgcggttttccg
ggattcccgggccccattgggttagacggcaaaccgggccacccaggacccaaaggggag
acgggtctgatgggcccccgaggacagccgggaccccaaggacaaaagggagaaaagggc
cagtgtggagagcacccgcaccggctgctgcctctcctcaattcagtgcggctggctcca
ccccctgtcataaaaaggcggaccttccagggtgagcagggccaggccggcatccaaggc
cccccaggccccccaggccctcctggaccgattggacctctggggcacccaggactgcca
gggcccatggggccacccggcttacctgggcctcctggaactaagggagatcctggaatc
cagggctaccatggccggaagggagagcggggcatgccggggatgccgggcaagcatgga
gccaagggggcgcccgggatcgccgtggctggaatgaagggtgagctgggggccccagga
gccaagggtgacaagggagctgtgggcccccctgggctacctggcctcctgggacagaag
ggagagaaaggcagtgctggcaacgccattggaggaggccgaggggagcctggccctccg
gggctccctgggcccccagggccaaagggagaagctggcgttgatgggcaggctggcccc
ccaggatggcaaggagacaagggggagcctggagcggttggagaacagggacccactggc
cccaagggctccaagggagagccagggaaaggggagatggtggactacaatggaaacatc
agcgatgccctccaggaaatccggacactggccttgatgggcccccctggtcttcccggg
caaatcggcccacctggagctccagggaccccaggccagaagggggagattggactgcca
ggccctccaggacatgacggagaaaagggacctcgaggcaagccaggggacctgggcccc
gctggtccagaaggacccccaggaaaggatgggcctccagggatgaagggagaagatggc
cggatggggagcccgggggagaagggggagagaggagagacaggacaagcaggctccccg
ggagagaaaggagtgcccggggagaagggtgacccaggtgtggaggtgcctgggccacca
gggctagaggggcctcctggacctcctggtctccaaggtgttcctggaccaaagggggag
gcaggactagatggagcgaggggagagaagggtgccgcgggggaaaaaggagaccgagga
cctctgggattgcccggaactccgggaccaattggagttccaggccctgcaggaccaaag
ggcgagaggggcagcaaaggtgaccctggcatgacaggaccaacaggagcagctgggctt
cctggtttacacggaccacctggggacaaagggaaccggggggagagggggaagaaaggc
tctagagggcctaaaggggataagggagaccaaggagcgcctggattagatgccccctgc
ccgttgggtgaagacggcctaccagtccagggctgctggaacaagggtcagggtccttgg
ttagtcgccaagaagtga
DBGET
integrated database retrieval system
