Echinops telfairi (small Madagascar hedgehog): 101661320
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Entry
101661320 CDS
T08707
Symbol
RXRG
Name
(RefSeq) retinoic acid receptor RXR-gamma isoform X1
KO
K08526
retinoid X receptor gamma
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03320
PPAR signaling pathway
etf04659
Th17 cell differentiation
etf04919
Thyroid hormone signaling pathway
etf04920
Adipocytokine signaling pathway
etf04928
Parathyroid hormone synthesis, secretion and action
etf05200
Pathways in cancer
etf05202
Transcriptional misregulation in cancer
etf05207
Chemical carcinogenesis - receptor activation
etf05216
Thyroid cancer
etf05222
Small cell lung cancer
etf05223
Non-small cell lung cancer
etf05226
Gastric cancer
etf05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
101661320 (RXRG)
09152 Endocrine system
04920 Adipocytokine signaling pathway
101661320 (RXRG)
03320 PPAR signaling pathway
101661320 (RXRG)
04919 Thyroid hormone signaling pathway
101661320 (RXRG)
04928 Parathyroid hormone synthesis, secretion and action
101661320 (RXRG)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101661320 (RXRG)
05202 Transcriptional misregulation in cancer
101661320 (RXRG)
05207 Chemical carcinogenesis - receptor activation
101661320 (RXRG)
09162 Cancer: specific types
05226 Gastric cancer
101661320 (RXRG)
05216 Thyroid cancer
101661320 (RXRG)
05222 Small cell lung cancer
101661320 (RXRG)
05223 Non-small cell lung cancer
101661320 (RXRG)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
101661320 (RXRG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
etf03000
]
101661320 (RXRG)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
etf03310
]
101661320 (RXRG)
Transcription factors [BR:
etf03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
101661320 (RXRG)
Nuclear receptors [BR:
etf03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
101661320 (RXRG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
Motif
Other DBs
NCBI-GeneID:
101661320
NCBI-ProteinID:
XP_004706820
LinkDB
All DBs
Position
Unknown
AA seq
463 aa
AA seq
DB search
MYGNYSHFMKFPTGFGGPPSHSGSTSMSPSAVLSAGKPMDSHPGYTDTPVSAPRTLSAVG
PPLNALGSPYRVITSAMGPPSGALAAPPGINLVAPPSSQLNVVNSVGNSEDIKPLPGLPG
IGNMNYPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLLYTCRDNKD
CLIDKRQRNRCQYCRYQKCLVMGMKREAVQEERQRSRERAESEAEAAHSGHEDMPVERIL
EAELAVEPKTESYGDMSVENSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLTLEDQVI
LLRAGWNELLIASFSHRSVSVQDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKD
MQMDKSELGCLRAIVLFNPDAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGRFAKLL
LRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLETPLQIT
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtatggaaattattctcacttcatgaagtttcccaccggctttggcggcccccccagc
cacagtggctctacttccatgagcccgtcggcagtcttgtctgcagggaagccaatggac
agccaccccggctacactgacacccctgtgagtgctccacggactctgagtgcagtgggg
ccccccctcaatgctctgggttctccttacagagtcatcacatctgccatgggccccccc
tcaggagctctggcagcccctccgggaatcaacttggtggccccacccagttctcagcta
aatgtggtgaacagcgtcggcaactcagaggacatcaagcctttaccagggctcccaggg
attggaaacatgaactacccatccaccagccctgggtctctggttaaacacatctgtgcc
atctgtggggacagatcgtcaggaaagcactacggggtgtacagctgtgaaggctgcaaa
ggcttcttcaagaggacgatccggaaagacctcctctacacgtgccgggataataaggac
tgcctcattgacaagcgccaacgcaaccgctgccagtactgccgctaccagaagtgcctg
gttatgggcatgaagcgggaagcggtgcaagaagaaaggcagaggagccgggagcgagca
gagagtgaggcagaggctgcccatagcggccacgaagacatgcctgtggagaggattcta
gaagccgaacttgctgttgagccaaagacagaatcctacggtgacatgagcgtggagaac
tcgacaaatgaccctgtcaccaacatatgtcacgcggctgataagcagcttttcaccctt
gttgaatgggccaagcgcatcccccacttctcagacctcacgctggaggaccaggtcatt
ctgctccgggcagggtggaacgagctgctgattgcctccttctcccaccgctccgtctct
gtgcaggacggaatccttctagccacgggcttacacgtccaccggagcagcgctcacagt
gctggggtcggctccatctttgacagagttctgacggaactggtttccaaaatgaaggat
atgcagatggataagtcggagttggggtgcctgcgagccattgtgctgtttaacccagat
gccaagggtctgtccaacccatctgaggtcgagacgctgcgagagaaggtgtatgccacg
ctcgaggcctacaccaagcagaagtatccggaacagccaggcaggttcgccaagctgttg
cttcgcctcccagccctgcgctccatcggcctgaaatgcctggagcacctcttcttcttc
aagctcataggagacacgcccattgacaccttcctcatggagatgttggaaaccccgctg
cagattacctga
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