Echinops telfairi (small Madagascar hedgehog): 101661404
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Entry
101661404 CDS
T08707
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X4
KO
K12821
pre-mRNA-processing factor 40
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101661404 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
etf03041
]
101661404 (PRPF40A)
Spliceosome [BR:
etf03041
]
Complex A
U1 snRNP components
U1 related factors
101661404 (PRPF40A)
Complex B
101661404 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
101661404
NCBI-ProteinID:
XP_004703875
LinkDB
All DBs
Position
Unknown
AA seq
956 aa
AA seq
DB search
MRPGTGAERGGLMVSEMENQPPLRGTGNGERRLPDSSLCSSSWVSADGFLRRRPSMGHPG
MHYAPMGMHPMGQRANMPPVPHGMMPQMMPPMGGPPMGQMPGMMSSVMPGMMMSHMSQAS
MQPALPPGVNNMDVAAGTASGAKSMWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQ
LLSKCPWKEYKSDSGKPYYYNSQTKESRWAKPKELEDLEGYQNTIVAGSLITKSNLHAMI
KAEENSKQEESTTTSTAPVPTTEIPTTMSTMAAAEAAAAVVAAAAAAAAAAAAANASAST
STANTVSGTVPVVPEPEVTSIVATVVDNENTVTISTEEQAQLTSSTAVQEQSVEISSNTE
EASKQETVADFTPKKEEEESQPAKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKM
IINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLENHEKMTSTT
RYKKAEQMFGEMDVWNAISERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEALKNILDNM
ANVTYSTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKSLL
RERRRQRKNRESFQVFLDELHEHGQLHSMSSWMELYPTISSDIRFTNMLGQPGSTALDLF
KFYVEDLKARYHDEKKIIKDILKDKGFIVEVNTTFEDFVAVISSTKRSTTLDAGNIKLAF
NSLLEKAEAREREREKEEARKMKRKESAFKSMLKQAAPPIELDAVWEDIRERFVKEPAFE
DITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKHHRKRSRSRSGSDSDDDDSHS
KKKRQRSESRSASEHSSSAESERSYKKSKKHKKKSKKRRHKSDSPESDAEREKDKKEKDR
ESEKDRTRQRSESKHKSPKKKTGKDSGNWDTSGSELSEGELEKRRRTLLEQLDDDQ
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgaggccggggacaggagccgagcgtggaggcctcatggtgagtgaaatggagaaccaa
cctccgttgcggggtaccgggaacggggagcggagattgcccgactcaagcctctgctcc
agctcttgggtctctgctgacggcttcctgaggagacggccttcgatgggacaccctggc
atgcattatgctcccatgggaatgcaccctatgggtcagagagccaatatgccaccggta
cctcatggaatgatgccgcaaatgatgccccctatgggagggccaccaatgggacaaatg
cctgggatgatgtcttcagtaatgcctggcatgatgatgtctcatatgtctcaggcttct
atgcagcccgccttaccgccaggagtaaataatatggatgtagctgcaggtaccgcatct
ggtgcaaaatccatgtggactgaacataaatcacctgatggaaggacttactactacaat
actgaaacaaagcagtctacttgggagaaaccagatgatcttaaaacacccgctgagcaa
ctgctatctaaatgcccttggaaggagtacaaatctgactcaggaaagccttactattat
aattctcaaacaaaagaatcccgctgggccaaacctaaagaacttgaggaccttgaagga
taccagaataccattgttgctggaagtcttattacaaaatcaaacctgcatgcgatgatc
aaagccgaagaaaacagtaagcaagaagagtccactaccacctcaacagccccagttcct
acaacagaaattccaactacaatgagcactatggctgctgcagaagctgcagctgcagtt
gttgcagcagctgctgcagctgccgctgccgctgctgcagccaatgccagtgcttccact
tctactgctaatactgtcagtgggactgttccagttgttcctgaacctgaagttacttcc
attgttgccactgttgtagataatgaaaacacagtaactatttccactgaagaacaagca
cagcttactagcagcactgctgttcaagagcaaagtgttgaaatatccagtaatactgaa
gaagcatctaagcaggaaactgtagctgattttactcccaaaaaggaagaagaagaaagc
cagccagcgaaaaaaacatacacttggaatacaaaagaagaggcaaagcaagcttttaaa
gaattattgaaagaaaagcgggttccatccaacgcttcatgggaacaagctatgaaaatg
ataattaatgacccacgatacagtgctttagcaaagctgagtgaaaaaaaacaagccttt
aatgcttataaagtgcagactgagaaagaagaaaaagaagaagcaagatcaaaatacaaa
gaggctaaagagtcctttcagcgttttcttgaaaatcatgaaaaaatgacttctacaacc
agatacaaaaaagcggagcaaatgtttggtgaaatggatgtctggaatgctatctcggaa
cgtgatcgtcttgaaatctatgaagatgttttgttctttctttcaaaaaaagaaaaggaa
caagcaaagcaattgcgaaagagaaactgggaagccttaaaaaatatacttgataacatg
gctaatgtaacatactctactacttggtctgaagctcagcaatatctgatggataatcca
acttttgcagaagatgaggagttacagaacatggacaaagaagatgcattaatttgcttt
gaagaacacatccgtgctttagaaaaggaagaagaagaagaaaaacaaaagagtttgctg
agggagagacgacgacagcgtaaaaatagggaatcttttcaggtatttttagatgaattg
catgaacatggacaactacattctatgtcatcttggatggaattgtatccaactattagt
tctgacattagattcactaatatgcttggtcagcctggatcaactgcacttgatcttttc
aagttttatgttgaggatcttaaagcacgttatcatgatgagaagaagataataaaagac
atcctaaaggataaaggatttatagttgaagtaaatactacatttgaagacttcgtggct
gttatcagttcaactaaaaggtcaaccactttagatgctggaaatattaaactggctttc
aatagtttactagaaaaggcggaagcccgtgagcgtgaaagagaaaaggaagaggctcgg
aagatgaagagaaaagaatctgcctttaagagtatgttgaagcaggctgctcctccaatc
gaactggatgccgtctgggaagatatacgagagagatttgtaaaagagccagcatttgag
gacataacacttgagtctgaaagaaagcgaatatttaaagattttatgcatgtgcttgag
catgaatgtcagcaccatcactcaaagaacaagaaacattctaagaaatctaaaaaacat
cataggaaacgttcccgctctcgatcgggatcagattcagatgatgatgacagccattca
aagaaaaaaagacagcggtctgaatcgcgttctgcttcagagcattcttctagtgcagag
tctgagagaagttataagaagtccaaaaagcataagaagaaaagcaagaagaggaggcat
aaatctgattcaccagagtcagatgctgagcgagagaaggacaagaaagaaaaagaccgg
gaaagtgaaaaggacagaaccagacaaagatcggagtcaaaacacaaatcacccaagaaa
aaaactggaaaagattctggtaattgggatacttctggtagtgaactgagtgaaggagaa
ttagaaaaacgaagaaggacccttttggagcaactggatgatgatcaataa
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