Echinops telfairi (small Madagascar hedgehog): 101661415
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Entry
101661415 CDS
T08707
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03040
Spliceosome
etf05202
Transcriptional misregulation in cancer
etf05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101661415 (DDX5)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
101661415 (DDX5)
05205 Proteoglycans in cancer
101661415 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
etf03041
]
101661415 (DDX5)
03009 Ribosome biogenesis [BR:
etf03009
]
101661415 (DDX5)
Enzymes [BR:
etf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101661415 (DDX5)
Spliceosome [BR:
etf03041
]
Complex A
U1 snRNP components
U1 related factors
101661415 (DDX5)
Complex B
101661415 (DDX5)
Ribosome biogenesis [BR:
etf03009
]
Eukaryotic type
Pre-60S particles
Helicases
101661415 (DDX5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
ERCC3_RAD25_C
Cas3-like_C_2
SNF2-rel_dom
BNIP2
Motif
Other DBs
NCBI-GeneID:
101661415
NCBI-ProteinID:
XP_004707336
UniProt:
A0ABM0ITJ9
LinkDB
All DBs
Position
Unknown
AA seq
615 aa
AA seq
DB search
MSGYSSDRDRGRDRGFGAPRFGGSRAGPLSGKKFGNPGEKLVKKKWNLDELPKFEKNFYQ
EHPDLTRRTAQDVETYRRSKEVTVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAI
QAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELA
QQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLR
RTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHI
NIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRK
MRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPN
SSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVEDRGS
GRSRGRGGMKDDRRDRYSAGKRGGFNTFRDRENYDRGYSSLLKRDFGAKTQNGVYTAANY
TNGSFGSNFVSAGIQTSFRTGNPTGTYQNGYDSTQQYGTNVPNMHNGMTQQAAYAYPATA
AAPMIGYPMPTGYSQ
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggttattcgagtgaccgagaccgcggccgggatcgagggtttggggcacctcga
tttggaggaagtagggcagggcccctgtctggaaagaaattcggaaatcctggggagaaa
ctagttaaaaagaagtggaatctcgacgagctgcccaaatttgagaagaatttttatcaa
gagcatcctgatttgactaggcgcacagcgcaagatgtggagacatacagaagaagcaag
gaagttacagttagaggacacaactgcccgaagccagttttgaatttttatgaagcaaac
ttccctgcaaatgtcatggatgtgattgcaaggcagaactttaccgaacctaccgccatt
caagctcaggggtggccagttgctctaagtggattagatatggtcggagtagcacagact
ggatccgggaaaacattgtcttatttgctgcctgccattgtccacatcaatcatcagcca
ttcctagagagaggtgatgggcctatttgcttggtgctggcgccaactcgagaactggcc
caacaggtacagcaggtagctgctgaatactgtagagcatgtcgcttgaagtctacttgc
atctatggtggtgctcccaagggaccacagatacgcgatttggagagaggtgtggaaatc
tgtatcgcaacacctggaagactgattgactttttagagtgtgggaaaaccaatctgcga
agaacaacttaccttgtccttgatgaggctgatagaatgcttgatatgggctttgaaccc
caaataaggaagattgtggaccagatcagacctgacaggcaaaccttaatgtggagtgca
acttggccaaaagaagtaagacagcttgctgaagatttcctgaaagattacattcatata
aacattggtgcattggaactgagtgcaaaccacaacattcttcagattgtggatgtgtgt
catgatgtagagaaggatgaaaaactgattcgtctaatggaagagataatgagtgagaag
gagaataaaactattgtttttgttgaaaccaaaagaagatgtgatgaacttaccagaaaa
atgaggagagatgggtggcctgccatgggtatccatggtgataagagtcaacaggagcga
gactgggttctaaatgaattcaaacatggaaaagctcctattctgattgctacagatgtg
gcctccagagggctagatgtggaagatgtgaaatttgtcatcaattatgactaccctaac
tcctcagaggattatattcatcgaattggaagaactgctcgcagtaccaaaacgggcaca
gcatacactttctttacacctaataacataaagcaagtgagcgaccttatctctgtgctt
cgtgaagccaatcaagcaattaatcccaagttgcttcagctggtcgaagacagaggttca
ggtcgttccaggggtagaggaggcatgaaggatgaccgacgggacagatactctgcgggg
aaaaggggtggattcaacacctttagagacagggaaaactatgacagaggttactctagt
ctgcttaagagagattttggagcaaaaacccaaaatggtgtttacactgctgcaaattac
accaatgggagctttggaagtaattttgtgtctgctggtatacagaccagctttaggact
ggtaatccaacagggacttaccagaatggttacgatagcactcagcaatatggaactaac
gttccaaatatgcacaatggtatgacccagcaggcagcatatgcatatcctgctactgca
gctgcacctatgattggttatccaatgccaacaggatattctcaataa
DBGET
integrated database retrieval system
