Echinops telfairi (small Madagascar hedgehog): 101662186
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Entry
101662186 CDS
T08707
Symbol
SOX17
Name
(RefSeq) transcription factor SOX-17
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
101662186 (SOX17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
etf03000
]
101662186 (SOX17)
Transcription factors [BR:
etf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
101662186 (SOX17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HTH_24
Motif
Other DBs
NCBI-GeneID:
101662186
NCBI-ProteinID:
XP_004697618
LinkDB
All DBs
Position
Unknown
AA seq
410 aa
AA seq
DB search
MSSPDAGYASDDQSQARSVLPAVMAGLGPCPWAEALSPLGEGKVKGEAAAAASGAPAGAS
GRAKGESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVE
EAERLRVQHMQDHPNYKYRPRRRKQVKRLKRVEGGFLHGLADPQSTILGHDGGRGAMEGL
GLPFAEQGFAAGPPLLPPHMGGHYRDCQGLGAPPLESYPLPTPDTSPLDGVEPDAAFFAA
PLPVDCPAASGAYTYPQASDYAGHPEAPAGPLHSRLGAEPAGPALPGLLTPPSALHMYYG
ALGSPPPAGGARCFQVQPPAQHPAGPGQPSPPPETLSCRDSGDPNQPASLLGEVDRTEFE
QYLHFVCKPEMGHPYQGHDSSVTLPDSHGALSSVVSDASSAVYYCNYPDV
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtccggatgcgggatacgccagtgacgaccagagccaggctcgcagcgtgctg
ccggcggtgatggcggggctgggcccctgcccgtgggccgaggcgctgagccccctcggg
gaaggcaaggtgaaaggcgaggcggcggcggcggccagcggcgcgccggccggggcctcg
ggtcgggccaagggcgagtcccgaatccggcggcccatgaacgccttcatggtgtgggcg
aaggacgagcgcaagcggctcgcgcagcagaacccggacctgcacaacgctgagctgagc
aagatgctgggcaagtcttggaaggcgctgacgctggcggagaagcgcccctttgtggag
gaggccgagcggctgcgggtgcagcacatgcaggaccaccccaattacaaataccggccg
cggcgccgcaagcaggtgaagcgactgaaaagggtggagggaggcttcctgcacggtctc
gccgacccccagtccaccatcctgggccacgacggtggtcgcggggccatggagggcctg
ggcttgccctttgcggagcaaggcttcgccgctggcccgccactgctgcccccgcacatg
ggcggccactaccgcgactgccagggcctgggcgcgccccctctcgagagctacccgctg
cccacgcccgacacgtccccgctggacggcgtggagcccgacgcagccttcttcgcggcc
ccgctgcccgtggactgcccagcggcctcgggtgcctacacttacccgcaggcctcggac
tacgcaggacacccagaggcgcccgccggacccctgcattccaggctgggcgcggagccc
gcgggccctgcgctgccgggcctcctcacgccccccagcgccctgcacatgtactacggc
gccctgggctcgccgcccccggcgggcggcgcgcgctgtttccaggtgcagccccctgct
cagcaccctgcggggcctgggcagccatcgccccctccggagaccctgtcctgtcgggac
agcggggacccgaaccagccagccagtctcctcggggaggtggaccgcacggagtttgaa
caatacctgcactttgtgtgcaagcccgagatgggccacccctaccaggggcacgactcg
agtgtgactctcccggacagtcatggggccctctcctcagtggtgtctgatgccagttct
gccgtatattactgcaactatcctgacgtttga
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