Echinops telfairi (small Madagascar hedgehog): 101662280
Help
Entry
101662280 CDS
T08707
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03013
Nucleocytoplasmic transport
etf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101662280 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
101662280 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etf03019
]
101662280 (THOC2)
03041 Spliceosome [BR:
etf03041
]
101662280 (THOC2)
Messenger RNA biogenesis [BR:
etf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
101662280 (THOC2)
Spliceosome [BR:
etf03041
]
Complex C
Other components
EJC/TREX
101662280 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
101662280 (THOC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
101662280
NCBI-ProteinID:
XP_045151813
LinkDB
All DBs
Position
Unknown
AA seq
1644 aa
AA seq
DB search
MAAATVVVPAEWIKNWEKSGRGEFLHLCRIFSENKSHDSSSYRDFQQALYELSYHVIKGN
LKHEQASNVLNDISEIRDDMPSILADVFCILDIETNCLEEKSKRDNFTQLVLACLYLVSD
TVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELG
QDLSGNITSDLILENIKSLIGCFNLDPNRVLDVILEVFECRPEYDDFFIPLLESYMSMCE
PQTLCHILGFKFKFYQEPSGETPSSLYRVAAVLLQFNLIDLDDLYVHLLPADSCIMDEHK
QEIIEAKQIVRKLTMVVLSSDKLDEREKEKEKEDEKVEKLPDNQKLGLLEALLKIGDWQH
AQNIMDQMPPYYAASHKLIALAICRLIHIIIEPLYRRVGVPKGAKGSPVAALQNKKAPKQ
AETFEDLRRDVFHMFCYLGPHLSHDPILFAKMVRIGKSFMKEFQSDGSKQEDKEKTEVIL
SCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQHRYHLYGQWKNETYNSHPLLVK
VKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDS
LKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIDLAGL
LQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIR
NTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQF
GGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKSEKGS
KQQHKVHKYITSCEIVMAPVHEAVVSLHISKVWDDISPQFYATFWSLTMYDLAVPQTSYE
REVNKLKIQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQMEHVQRVLQRLKLEK
DNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCARFVELVHQQKTPNFSTLLCYDRV
FSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRATYEKECGNYPGFLTILRATGFD
GGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNL
GQALERRVQKIYEEEKEKRPDLYALAMGYSGQLKSRKSYMIPENEFHHKDPPPRNAVASV
QNGPGGGPSSSTSSSSSSSSSSSIGSTSKSDESSTEETDKSRERSQCGVKAVNKASNATP
KVNANNGNSGSNSKTIKENDKGKEKEKEKEKKEKTPATTPEARVLGKDGKEKPKEERPNK
DEKARETKERTPKSDKEKEKFKKEEKPKDEKFKPAVPNVESKSTQEKEREKEPSRERDIA
KEVKAKENNKGGGEKPAVSGPMKSPVPRSDIAEPDREQKRRKIDSHPSPSHSSTVKVTAA
PPNVPLGSENYASSPVISVHFVQDSLIELKDSSAKAKNEVFIGTLIPELYTNHTPTPLSK
SKEREMDKKDLDKSRERSRERERKDEKDRKERKRDHSNNDREVPPDLTKRRKEENGTMGV
SKHKSESPCESPYANEKDKEKNKSKSSSKEKGGDSFKSEKMDKISSGGKKESRHDKEKIE
KKEKRDSSGGKEEKKHHKSSDKHR
NT seq
4935 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcgactgtggtggttcccgcagagtggataaagaactgggagaaatcaggg
agaggcgaatttttgcatttatgccgaattttcagtgaaaataaaagccatgatagttca
agttacagagatttccagcaagctctctatgagttatcatatcatgtcattaagggaaat
ctaaaacatgaacaagcatctaatgttcttaatgacattagtgagatccgtgatgatatg
ccctccattcttgctgatgtattctgcatattagatatcgagacaaattgtctagaagaa
aaaagtaagagagacaattttacacagttggtattagcatgtttgtatttagtttcagac
acagttctaaaggaacgcctggatccagagacattggaatctttggggcttatcaaacaa
tcacaacaattcaatcaaaagtcagtaaaaatcaagacaaaacttttttataagcaacaa
aaattcaatttgctgagagaagagaatgaaggttatgccaagctgattgctgaattgggg
caagatttatctggaaatattactagtgatttaatcttagaaaatataaaatctttaata
ggatgttttaacctggatcccaatagagttttggatgtcattttagaagtatttgaatgc
aggccagaatacgatgacttctttataccattattagaatcttacatgagtatgtgtgaa
ccgcaaacattgtgtcatattcttgggttcaaattcaagttttatcaggaaccaagtgga
gagactccgtcgtctttatacagagttgcagctgtacttctgcagttcaatcttattgat
ttagatgatctttatgtacatcttcttccagctgatagctgcattatggatgaacacaaa
caagaaataatagaagctaagcaaattgttagaaaacttacaatggttgtattgtcttct
gacaaacttgatgaacgagaaaaagaaaaggaaaaagaagatgagaaagtagaaaagcta
cctgacaaccaaaaacttggtttgttggaagccttgttaaagatcggtgattggcagcat
gcacagaacattatggaccagatgcctccatactatgcagcttcacataagctaatagct
cttgctatttgcaggctcattcacataattattgagcctctctaccgaagagttggcgtt
cccaaaggtgctaaaggctcacctgttgctgctttgcaaaacaagaaagcacccaaacaa
gcagagacttttgaagatctgaggagagatgtattccatatgttctgttaccttggtcct
catctgtctcatgatcccattttatttgcaaaaatggttcgcatagggaaatcatttatg
aaggagtttcagtctgatggaagcaaacaagaagataaagaaaaaacggaagtcatcctc
agctgtttacttagcattactgaccaggtactactaccatctctttctttgatggactgc
aatgcttgtatgtctgaggaactatggggaatgtttaaaacatttccatatcagcataga
tatcacctatatggccagtggaagaatgaaacttataacagtcatccacttttagtaaaa
gttaaagctcaaacaatagacagagccaaatatatcatgaagcgtctaaccaaggaaaat
gtgaaaccttctggaagacaaatcgggaagctgagccacagcaatccaacgattttgttt
gattacatcttgtcacaaatacagaagtatgataacttaataacacctgtagtagattca
ctgaaatacctcacttcattgaattatgatgtcttggcctattgcatcattgaagctcta
gctaatccagaaaaggagaggatgaaacatgatgacacaacgatctccagttggcttcag
agtctggctagtttctgtggggcagtttttcgtaaatacccaattgatcttgctggtctt
cttcaatatgttgccaatcagctaaaggcaggcaaaagttttgacctgctaatattgaaa
gaagtggtacaaaaaatggcaggaatagaaataacagaagaaatgacaatggagcaatta
gaagccatgactggtggagagcagctaaaagctgaaggtggctattttggccagatcaga
aacactaagaaatcctctcagaggctaaaagatgcactgttagaccacgatcttgcactt
cctctttgtttgcttatggctcaacagcgaaatggtgtgatctttcaggaaggtggagag
aaacacttaaaacttgtgggaaaactgtatgatcagtgtcatgataccttggtacagttt
ggtgggtttttggcatctaatctaagcacagaagattatataaagcgagtaccttcaatt
gatgtgctttgtaatgaatttcatacacctcatgatgcagcatttttcctgtctcggcca
atgtatgcacaccatatttcatcaaaatatgatgaacttaagaaatcagaaaagggaagt
aaacagcagcataaagttcataaatatatcacatcatgtgagattgtgatggctcctgtc
catgaagcagtggtttccttgcacatttccaaagtctgggatgatatcagccctcaattc
tatgccacattctggtcattgacaatgtatgaccttgcagttccacaaaccagctacgaa
agagaagtgaacaagcttaaaatacagatgaaagcaattgatgacaatcaggaaatgcct
ccgaacaaaaagaaaaaagagaaggagcgttgtactgcccttcaggacaagcttcttgaa
gaagaaaagaaacagatggaacatgtacagcgagttctacaaagactgaaactggaaaag
gacaactggcttttagcaaaatctaccaaaaatgagaccatcacaaaatttctacagctg
tgtatttttcctcgatgtattttttcagcaattgatgctgtttactgtgctcgttttgtt
gaattggtacatcaacagaaaactccaaatttttccacacttctttgctatgatcgagtt
ttctctgatataatttacactgttgcaagctgtacggaaaatgaagctagccgatatggc
agattcctttgctgtatgttagagacagtgacaaggtggcacagtgatagagccacatac
gaaaaggaatgtgggaactatccaggattccttactatattacgagcaactggatttgac
ggtgggaataaagctgatcagttagactatgaaaattttcgacatgttgtgcataaatgg
cattacaaactaaccaaggcatcagtacattgccttgaaacaggagaatatacacacatc
agaaatatcttgattgtgctaacaaaaatacttccttggtaccccaaagttttgaatctg
ggccaggctttggaaagaagagtgcaaaaaatttacgaagaagaaaaggagaagaggcct
gatctatatgcattggctatgggctactctgggcaattgaaaagtagaaagtcatacatg
atacctgaaaatgagtttcatcacaaagacccccctccgaggaatgcagttgccagtgta
caaaatgggcctggtggcgggccttcttcctctacttcttcatcatcgtcttcgtcgtcg
tcatcatcgataggaagtacatctaaatcggatgaaagcagtactgaggagactgataaa
tccagggagagatctcagtgcggtgtgaaagctgttaacaaagcttctaatgccacaccc
aaagtgaatgccaacaatggaaatagtggctctaatagcaaaaccattaaagaaaatgac
aaaggaaaagaaaaagagaaagagaaagagaaaaaagaaaagactccagctactactcca
gaggccagggtacttggtaaagatggtaaagaaaaaccaaaagaagagcgaccaaataaa
gatgaaaaagcaagagagaccaaggaacgaacaccaaaatctgacaaagaaaaagaaaaa
ttcaagaaggaagaaaagcctaaagatgaaaaattcaagcccgctgtccccaatgtagaa
tcaaaatcaactcaagaaaaggaaagggagaaggagccatccagagaaagagatatagca
aaggaggtgaaagccaaggaaaataataaaggaggaggagaaaaaccagctgtttctggg
ccaatgaaatctccagttccccgatccgatattgcagagcctgacagggaacaaaaacgt
cgcaaaattgattctcacccttctccatcacattcctcaacagtaaaggttacagccgca
cctcccaatgttcctctgggttctgagaactatgccagctcacctgtcatctccgttcat
tttgtacaggacagtctcatcgaactcaaggattcttcagcaaaggccaagaatgaagta
tttattggaacattaataccagaactctacactaatcatactcctacaccactatccaag
agtaaggagagagaaatggacaagaaagatttggacaagtcgagggaaagatccagagag
agagagagaaaagatgaaaaggacaggaaggaacggaaaagggatcattcaaacaatgac
cgcgaagtgccgccggacttaaccaagaggcgtaaagaggaaaatggaacaatgggagtt
tcaaaacataaaagtgaaagtccatgtgagtctccttatgcaaatgagaaagacaaggaa
aaaaataagtcaaagtcttcaagcaaagaaaaaggtggtgattcatttaaatctgaaaag
atggataaaatctcctccggtggcaaaaaggaatccaggcatgataaagaaaagatagag
aagaaagaaaaacgggatagttcaggaggaaaggaagagaagaaacatcataagtcctca
gataagcacagataa
DBGET
integrated database retrieval system
