Echinops telfairi (small Madagascar hedgehog): 101662403
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Entry
101662403 CDS
T08707
Symbol
PTCH2
Name
(RefSeq) protein patched homolog 2 isoform X1
KO
K11101
patched 2
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf04340
Hedgehog signaling pathway
etf05200
Pathways in cancer
etf05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
101662403 (PTCH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101662403 (PTCH2)
09162 Cancer: specific types
05217 Basal cell carcinoma
101662403 (PTCH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sterol-sensing
TRA2_N
Patched
Motif
Other DBs
NCBI-GeneID:
101662403
NCBI-ProteinID:
XP_004699534
UniProt:
A0ABM0IGI9
LinkDB
All DBs
Position
Unknown
AA seq
1199 aa
AA seq
DB search
MSDVVVSAVCLRLLFPFQTPVGSLKAPVWLRAYFQGLLFSLGCRIQRHCGKVLFLGLLVF
GALALGLRVAIIETDLEQLWVEVGSRVNQELHYTKEKLGEEAAYTSQMLIQTARRDGENV
LTPEALGLHLQAALSASKVQVSLYGKSWDLNKICYKSGVPLIENGMIERMIEKLFPCVIL
TPLDCFWEGAKLQGGSAYLPGRPDIQWTNLDPEQLLEELGPFASLESFRELLDKAQVGQA
YVGRPCLHPDDLHCPASAPNHQSRQPPNVAKELSGGCHGFSYKFMRWQEELLLGGMTRDP
QGQLLSAEALQSTFLLMSPRQLYEHFRGDYQTHDIGWSEEQAGAVLQAWQRRFVQLAQEA
LAENATQQIHAFSATTLDDILRAFSEVSTARLVGGYLLMLAYACLTMLRWDCAQSQGTVG
LAGVLLVALAVASGLGLCALLGLAFNAATTQVLPFLALGIGVDDVFLLAHAFTEAPPGTP
LQERTGECLQRTGTSVALTSINNMVAFFMAALVPIPALRAFSLQAAIVVGCNFAAVMLVF
PAILSLDLHRRHCQRLDVLCCFPSPCSTRVIQILPQELGDRAVPMGITHLTTTVQTFTHH
DANSQHVVTILPQAHLAPLPSDPLGSELFSPGGSTRDLLGQEEGTREKTACRSLACAHWN
LAHFARYRFAPVLLQPHSKTLVLVFFGALLGLSLYGATLVQDGLALTDVVPRGTKEHAFL
SAQLRYFSLYEVALVTQGGFDYARSQRALFDLHQRFSSLKAVLPLPATQAPRTWLHYYRN
WLQGIQAAFDHDWASGRITRHSYRNGSEDGALAYKLLIQTGDAQEPLDFSQLTTRQLVDQ
EGLIPPELFYMGLTVWVSSDPLGLAASQANFYPPPPEWLHDKYDTTGENLRIPAAQPLEF
AQFPFLLRGLQETADFVEAIEGARAACAEAGRAGVRAYPSGSPFLFWEQYLGLRHYFLLA
VCILLLCTFLVCALLLLSPWTASLVVLVLTMMTVELFGIMGFLGIKLSAIPVVILVASVG
IGVEFTVHVALGFLTTQGSRDLRAARALEHMFAPVTDGAVSTLLGLLMLAGSHFDFIVRY
FFVVLAVLTLLGLLHGLVLLPVLLSLLGPPPEVVQVYKESPEVLNPPTPRGGLRWGPPTT
LPQGFARVTTSMTVALHPPPLPGAYTHPTAEEPAWSPAANPAASTPGSLSPRGPCVATR
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgtggttgtaagtgctgtctgcctaaggcttctctttccattccagacccca
gttggcagcctgaaggctcctgtctggcttcgagcctacttccagggcctgctcttctct
ctgggctgcaggatccagaggcattgtggcaaagtgcttttcttgggactgctggtcttt
ggggccctggcactggggctccgcgtggccatcattgagacggacctggagcagctctgg
gtagaagtgggcagccgggtgaaccaggagctgcactacaccaaggagaagctgggggaa
gaggctgcgtacacctcccagatgctgattcagacggcgcgccgggacggggagaacgtc
ctcacgcccgaggcgctcggcctccacctccaggcagccctcagtgccagcaaagtccaa
gtctcgctctacggaaagtcctgggatttgaacaaaatctgctacaagtcaggagtcccc
ctcattgaaaatgggatgattgagcggatgatcgagaagctgtttccgtgtgttatcctc
actcccctcgactgcttctgggagggagccaagctccaggggggctctgcctatctgccg
ggccgccccgatatccagtggaccaacctggatccagagcagctgctggaggagctgggt
ccctttgcctccctcgagagcttccgggagctgctagacaaagcacaggtgggccaggcc
tatgtggggcggccctgcctgcaccccgatgacctccactgcccagctagtgcccccaac
catcagagcagacagcctcccaacgtggctaaagagctgagcgggggctgccacggcttc
tcctacaagttcatgcgctggcaggaggaactgctgcttggaggcatgaccagagaccct
caaggtcagcttttgagcgccgaggccctgcagagcaccttcctgctgatgagtccccga
cagctgtacgagcacttccggggcgactaccagacacatgacattggctggagtgaggag
caggccggcgccgtgctgcaggcctggcagcggcgctttgtgcagctggcccaggaggcc
ctggcggagaacgccacccagcagatccatgcattctccgccaccaccctggatgacatc
ctgcgagccttctctgaagtcagcaccgcccgcctggtgggaggctatctgctcatgctg
gcctatgcctgcctgacgatgctgcggtgggactgtgcccaatcccagggtaccgtgggc
ctggccggggtgctgctggtggcccttgccgtggcctcgggtctggggctctgcgcgctg
ctcggcctcgccttcaatgccgccaccacccaggtgctgcccttcttggcgttgggcatc
ggtgtggatgacgtcttcctgctagcacatgccttcactgaggctcccccaggcacccca
ctgcaggagcgcaccggtgagtgtctgcagcgcaccggcaccagcgtggcgctcacatcc
atcaacaacatggtcgccttcttcatggccgccctggtgcctatccctgcactgcgcgcc
ttctctctgcaggcagccatagtggttggctgcaactttgcagccgtgatgcttgtcttc
ccagccatcctcagcctggacctgcaccggcgccactgccagcgcctcgatgtgctgtgc
tgcttccctagcccctgctccacccgagtgattcagatcctgccccaggagctgggggac
agggcagttcccatgggcatcacccacctgaccaccacggtacagacctttacccaccat
gatgccaacagccagcatgtggtcaccatcctgcctcaggcccacctggcacccctacct
tcagacccactgggctctgagctcttcagcccaggagggtccacacgggaccttctaggc
caggaggaggggacaagggagaagacagcctgcaggtccctagcctgtgcccactggaac
ctggcccattttgcccgctatcggtttgcccccgtgctgctccaaccacacagcaagacc
ctggtgctggtgttcttcggtgctctcctgggcctgagtctttacggagcgaccctggtg
caggatggcctggccttgaccgacgtggtgcctcggggcaccaaggagcatgccttcctg
agcgcccagctcaggtacttctccctgtatgaggtcgccttggtgacccagggtggcttc
gactacgcccgctcccagcgcgccctcttcgatctgcaccagcgtttcagttccctcaag
gctgtgctgcccctgcccgctacccaggccccgcgcacgtggctgcactactaccgcaac
tggctccaaggaatccaggctgccttcgaccacgactgggcttcggggcgcatcacccgc
cactcctaccgcaatggctctgaggacggggccctggcctacaagctgctcatccagacc
ggggacgcccaagagccactggacttcagccagctgaccacccgacagctggtggaccag
gagggcctaattcccccggagctcttctacatggggctgaccgtgtgggtgagcagcgac
cccctgggcctggcagcctcgcaggccaacttctatccgccgccccccgagtggttgcac
gacaagtacgacaccaccggggagaaccttcgtatcccggctgcccagcctctggagttt
gcccagttccccttcctgctacgtggcctccaggagactgcggacttcgtggaagccatt
gagggggcccgggcagcgtgtgcggaagcaggcagggccggggtgcgtgcctaccccagt
ggctcccccttcctcttctgggagcagtacctgggcctgcggcactacttcctgctggct
gtctgcatcctgctcctctgcaccttcctcgtctgcgccctgctgctgctcagcccctgg
acggccagcctcgtggtgctggtcctgacaatgatgaccgtggagctctttggcatcatg
ggtttcctgggcatcaagctgagtgccatacctgtggtgatcctcgtggcctctgtgggc
atcggagttgagttcacagtccacgtggccctgggcttcctgaccacccaggggagccgg
gacctgcgggcggcccgggccctggagcacatgttcgccccagtgactgatggggccgtc
tccacgttgctgggtcttctcatgcttgctggctcccactttgacttcattgtgcggtac
ttcttcgtggtgctggctgtgctcacgctgctgggcctcctccacggactagtgctgctg
cccgtgctgctctccctcctgggtcccccaccggaggtggtacaggtgtacaaggagagc
ccagaggtcctgaacccccccactccacgaggagggctcaggtgggggccacccaccacc
ctgccccagggctttgccagagtgactacctccatgaccgtggccctgcacccacctccg
ctgcctggtgcctacacccacccaactgccgaggagcctgcctggtcccctgccgccaac
ccagctgccagcacccctggcagcctcagtcccaggggaccctgtgtggccaccaggtga
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