Echinops telfairi (small Madagascar hedgehog): 101662503
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Entry
101662503 CDS
T08707
Symbol
DDX27
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
etf03041
]
101662503 (DDX27)
03009 Ribosome biogenesis [BR:
etf03009
]
101662503 (DDX27)
Enzymes [BR:
etf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101662503 (DDX27)
Spliceosome [BR:
etf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
101662503 (DDX27)
Ribosome biogenesis [BR:
etf03009
]
Eukaryotic type
Pre-60S particles
Helicases
101662503 (DDX27)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25_NTPase-like
AAA_22
Cas3-like_C_2
PRK
Motif
Other DBs
NCBI-GeneID:
101662503
NCBI-ProteinID:
XP_004698107
UniProt:
A0ABM0IEC2
LinkDB
All DBs
Position
Unknown
AA seq
779 aa
AA seq
DB search
MFEELGLVPTIGDDEEVPLEPESDSGDDEEEEGPIVLGRRQKALQKNRSADFNPDFVFTE
KEGLYDGSWAMADVLSQLKKKRAATTLDEKIEKVRKKRKTEEKEAKAGKSEKKEAEAGKS
EEKAAEGSSEPAGQGDLGGRDKEGSEEEEELEESETDYSSAEESVLTKADMLKVKEQKKK
RKKGQEAGGFFEDASQYDENLSFQDMNLSRPLLKAISAMGFKQPTPIQKACIPVGLLGKD
ICACAATGTGKTAAFALPVLERLIYKPRQAAVTRVLVLVPTRELGIQVHSVTKQLAQFCN
ITTCLAVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRML
DEYFEEQMKEIIRMCAHHRQTMLFSATMTDEVKDLASVSLKSPVRIFVNSNTDVAPFLRQ
EFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLLGLQVGELHGNL
SQTQRLEALRRFKDEQIDILVATDVAARGLDIDGVKTVINFTMPNTTKHYVHRVGRTARA
GRAGRSVSLVGEEERKMLKEIVKAAKAPVKARILPQDVILKFRDKIEKMEKDVYSVLQLE
AEEKEMQHSEAQINTAKRLLEKGKEDPGQEPERSWFQTKEERKKEKIAKALQEFDLALRG
KKKRKKFMKDAKKKGEMTAEERSQFEILKAQMFAERLAKRNRRTKRARAMPEEEPARGPA
KKQKQAKKSVFDEELTNTSKKALKQYRAGPSFEERKKLGLPHQRRGGNFKSKSRYKRRK
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaggagctggggttagtcccgaccataggcgatgatgaggaggtgcctctggag
ccggagtccgactccggggacgacgaggaggaggaggggcccattgtgctgggcagaaga
cagaaagctttgcagaagaaccgaagtgctgatttcaaccccgactttgtcttcactgag
aaggagggcttgtacgatggcagctgggccatggctgatgtcttgagccagctcaagaag
aagagagcagccacgacgctagatgagaagattgagaaagttcgaaagaagaggaaaacg
gaggaaaaagaagccaaagctgggaagtcagaaaagaaggaagccgaggctgggaagtcg
gaggagaaagccgcagagggcagctctgagcccgcggggcagggagacttgggagggaga
gacaaggaaggctcagaagaagaagaggaattggaggaatcggagacggactactcctct
gctgaggagagcgtcctcaccaaagcagatatgctcaaagtgaaggagcagaagaagaag
aggaagaagggacaggaagcaggaggattttttgaagacgcctctcagtatgacgagaac
ctgtcattccaggacatgaacctctcccgacctctgctgaaggccatttccgccatgggc
ttcaagcagcccacccccatccagaaggcgtgtatccccgtgggcctgctggggaaggac
atctgtgcctgtgctgccactgggacaggtaaaaccgctgccttcgccctgccggttttg
gagcggctgatctacaagccccgccaggctgccgtcacccgagtcctggtgctggtcccc
acccgggagctgggcatccaagtgcactccgtcaccaagcagctggcccagttctgtaac
atcaccacgtgtctggctgtgggtggcctggacgtcaagtcacaggaagctgctctccgg
gctgcacctgacatccttatcgccacgccgggccggcttatcgaccacctccacaactgc
ccctccttccacctgagcagcatcgaggtgctcatcctggatgaggctgacaggatgctg
gacgagtacttcgaggagcagatgaaggagatcatccgcatgtgtgcccaccaccgccag
accatgctcttctcggccaccatgacggacgaggtgaaggacctggcctctgtgtccctg
aagagtcccgtccgcatattcgtcaacagcaacactgacgtggcgcccttcctgcggcag
gagttcatccgcatccggcccaatcgggagggggaccgggaggccatcgtggcagctctg
ttgacgagaaccttcactgaccacgtgatgctcttcacccagaccaagaagcaggcccac
cgcatgcacatcctcctggggctcctggggctgcaggtgggcgagctccacgggaacctg
tcccagacacagcggctggaggccctccgacgctttaaagatgaacagattgacatcctg
gtggccactgatgtggcagcccgtggccttgacattgatggcgtcaaaacggtcattaac
ttcaccatgcccaacaccaccaagcactatgtccatcgcgtggggcggactgcgcgggct
ggccgggcagggcgctctgtgtccctggtgggagaggaggagaggaagatgctgaaggag
attgtgaaggcggccaaggcccctgtgaaggcccggatactgccccaagatgtcatcctc
aagttccgggacaagattgagaaaatggagaaggacgtgtactcggtcctgcagctggag
gctgaggagaaggagatgcagcattcggaagcccagatcaacaccgccaagcggctcctg
gagaagggcaaggaggacccggggcaagagccagagaggagctggttccagaccaaagag
gagaggaagaaggagaagattgccaaggctctgcaggagtttgacttggccttaagagga
aagaagaaaaggaagaagttcatgaaggatgctaagaaaaagggggagatgacggctgag
gaaaggtcccagtttgaaatcctgaaggcacagatgtttgctgagcggctagccaaaagg
aaccgcaggaccaagagggcccgagcaatgcctgaggaagagccagcccgaggccctgct
aagaagcagaagcaggcgaagaagtcagtgtttgacgaggagctcacaaacaccagcaag
aaggccctgaagcagtatcgagctgggccttcctttgaagaaaggaaaaagctaggcttg
cctcaccagaggcgagggggaaactttaaatccaaatccagatacaagcggaggaagtag
DBGET
integrated database retrieval system
