Echinops telfairi (small Madagascar hedgehog): 101662855
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Entry
101662855 CDS
T08707
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03082
ATP-dependent chromatin remodeling
etf04714
Thermogenesis
etf05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101662855 (SMARCC2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
101662855 (SMARCC2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101662855 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
etf03021
]
101662855 (SMARCC2)
03036 Chromosome and associated proteins [BR:
etf03036
]
101662855 (SMARCC2)
Transcription machinery [BR:
etf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101662855 (SMARCC2)
Chromosome and associated proteins [BR:
etf03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101662855 (SMARCC2)
PBAF complex
101662855 (SMARCC2)
GBAF(ncBAF) complex
101662855 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_3
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
CD99L2
Motif
Other DBs
NCBI-GeneID:
101662855
NCBI-ProteinID:
XP_045144992
LinkDB
All DBs
Position
Unknown
AA seq
1170 aa
AA seq
DB search
MHEIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRVDRNVEMFMTIEKSLVQN
NCLTRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNSASHVVYPVPGNLEEEEWVRPV
MKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAKWVLDTDTFNEWMNE
EDYEVSDDKGPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRKRSPSPSPTPEAKKK
NAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKTVSTKKDSEAAPVKG
GTMTDLDEQEEESMEPAGKDEDENSTGNKGEQTKNPDLHEDNVTEQTHHIIIPSYAAWFD
YNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDV
CAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSGLVPLQPKTPQGRQV
DADPKAGRKGKELDELVPETAKGKPELQTSASQQMLNFPDKGKEKPADMQNFGLRTDMYT
KKNIPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLP
IEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKM
KEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPERVEESNTEEARVEG
QATDEKKESKEPREGGGATEEEVKEKSSEAPKKEDEKGKEGDSEKEPEKGDGDPGVDPEK
EKEPKEGQEEGLKEVVESEGDRKTKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERK
IKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAE
MRARQQHFQQMHQQQQQPPPSLPPGSQPLPPSGASGPPSVHGLAMAPASVAPAPAGSGAP
PGSLGPSEQIGQVGPPAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPG
AVPGSGHPGVAGNAPLGLPFGMPPPPPPAPSIIPFGSLAESISINLPPPPHLHGHHHHLP
FAPGTLPPPNLPVSMANPLHPNLPATATMPSSLPLGPGLGSAAAQSPAIVAAVQGNLLPS
ASPLPDPSTPLPPDPTAPSPGTVTPVPPPQ
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgcatgagatcaaatgcttcctagatttcaaagcaggaggttccctgtgccacatactt
gcagctgcctacaaattcaagagtgaccagggatggcggcgttatgatttccagaatcca
tcacgggtggaccgcaacgtggaaatgttcatgaccattgagaagtctttggtgcagaac
aactgcctaactcgaccaaacatctttctgtgtccggaaattgagcccaaactgctaggg
aaattaaaggacattatcaagagacaccaggggacagtcactgaggacaagaacagcgcc
tctcatgtcgtgtaccctgtcccagggaacctagaagaagaggaatgggtacgaccagtc
atgaagagggataagcaggttcttctgcactggggctactatcctgacagctacgacacg
tggatccccgccagtgaaatcgaagcctctgtggaagatgccccgacgcctgagaagccc
aggaaggttcacgccaagtgggtcctggacacggacaccttcaacgagtggatgaacgag
gaggactatgaagtcagcgatgacaagggccccgtctcgcgccggaagaagatttccgcc
aagacgctgacagatgaggtgaacagcccagactccgatcgacgggacaagaaggggggg
aactataagaagaggaagcgctccccgtctccctcacccaccccggaagctaagaagaaa
aatgctaagaaaggcccctcaacgccttacaccaagtctaaacggggccaccgggaagag
gagcaggaagacctgaccaaggacatggatgagccctcacctgtccccaacgtagaagag
gtgactttgcccaaaacagtcagcacgaagaaggactcggaggcagccccggtcaaaggc
ggcaccatgactgacctggacgaacaggaggaggaaagcatggagcctgcaggcaaggat
gaggatgagaacagtacggggaacaaaggggagcagaccaagaacccagacctgcacgag
gacaacgtgacagagcagacccaccacatcatcatccccagctacgcggcctggtttgac
tacaacagtgttcatgccatcgagcggagggctctccccgagttctttaacggcaagaac
aagtccaagactccggagatctacctggcctatcgaaacttcatgatcgacacctaccga
ctgaacccccaagagtacctcacctccacggcctgccgcaggaacctggcgggtgacgtc
tgtgccatcatgagggtgcatgccttcctagaacagtggggtcttattaactaccaggtg
gatgctgagagccggccaaccccaatggggcctccacccacctcccacttccatgtcttg
gcagacacgccatcagggctggtacccctgcagcccaagaccccacagggccgccaggtt
gatgctgatcccaaggctgggagaaagggcaaagagctggatgaactggtgcccgagacg
gctaagggcaagccagagctgcagacttctgcttcccagcaaatgctcaacttccccgac
aaaggcaaggagaaaccggctgacatgcagaactttgggctgcgcactgacatgtacacc
aagaagaacatcccctcgaagagcaaagctgcggccagtgccacccgcgagtggacggag
caggagaccctgttgctcctggaggcgctggaaatgtacaaagacgactggaacaaagtg
tcggaacacgtgggaagccgcacgcaggacgagtgcatcttgcatttccttcgcctgccc
atcgaagacccgtacctggaggactcggaggcctccctgggccccctggcctaccagccc
atccccttcagtcagtcgggcaaccccgtcatgagcacggtggccttcctcgcctcggtg
gttgatcctcgcgtcgcctcagctgctgccaagtcggccctcgaggagttctccaagatg
aaggaagaagtgcccacagccctggtggaggcccacgttcgcaaagtggaagaagcagct
aaagtgacaggcaaggcagacccagcctttggcctggagagcagtggcattgcgggaacc
acctcggacgagcctgagcgtgtcgaggagagcaacactgaagaggctcgggtggagggc
caggccacagatgagaagaaggagtccaaggaaccccgagaaggagggggcgccaccgag
gaagaagtgaaggagaagagcagtgaggctcccaagaaggaggacgagaaggggaaagaa
ggtgacagtgagaaggagccggagaagggcgatggggacccaggagtggatcccgagaag
gagaaggagccaaaggaaggccaggaggaaggacttaaggaagtggtggagtcagaggga
gaccggaagacgaaggtggagcgggacattggtgagggcaacctgtccaccgcagcggcc
gctgccctagccgctgccgccgtcaaagccaagcatctggctgccgtggaggagaggaag
atcaagtcgctagtggccctgttggtagagactcagatgaagaagctggagatcaaactg
cggcactttgaggagctggagacgatcatggaccgggagcgtgaagcgctggagtaccag
aggcagcagctgctggccgacagacaagccttccacatggagcagctcaagtacgccgag
atgcgggcccgacagcagcacttccagcagatgcaccagcagcagcagcagccaccgcca
agcctgccccccggctcccagcccctcccaccctcgggggcctctgggccaccctcagtc
catggcttggccatggctccggcctcagtggccccggcccctgctggcagtggggcccca
cccggaagcctgggcccctctgaacagattgggcaggtggggccacctgcagggccacag
cagcagcaaccagcgggagccccccagcctggggcagtcccaccaggggtacccccccct
ggaccccatggcccctcaccgttccccaaccaacaaactcctccctcaatgatgccaggg
gcagtgccaggcagcgggcacccaggcgtggcgggtaatgctcctttgggtttgcctttt
ggcatgccgcctcctcctccccctgctccatccatcatcccatttggtagcctcgccgag
tccatcagtattaaccttccccctcctcctcacctgcatgggcatcaccaccacctcccg
ttcgctccgggcactctccccccacctaacctgcctgtgtccatggcgaaccccctacat
cctaacctgccggcgaccgccaccatgccatcctccttgcctctcgggccggggctcgga
tccgccgcagcccagagccctgccattgtggcagctgttcagggcaacctcctgcccagt
gccagcccactgccagacccaagcaccccactgcctccagaccccacagcccccagccca
ggcacggtcacccctgtgccccctccacagtga
DBGET
integrated database retrieval system
