Echinops telfairi (small Madagascar hedgehog): 101663232
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Entry
101663232 CDS
T08707
Symbol
SCAF4
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
KO
K13167
SR-related and CTD-associated factor 4
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
etf03021
]
101663232 (SCAF4)
03041 Spliceosome [BR:
etf03041
]
101663232 (SCAF4)
Transcription machinery [BR:
etf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
101663232 (SCAF4)
Spliceosome [BR:
etf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
101663232 (SCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
101663232
NCBI-ProteinID:
XP_004711379
LinkDB
All DBs
Position
Unknown
AA seq
1143 aa
AA seq
DB search
MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV
PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN
GVFKIEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPPPVKVSSEPPQVTTNSIPAVPQLP
SSDAFAAVAQLFQTTQGQQLQQILQTFQQPPKPQSPAIDNAVMAQVQAITAQLKTAPTQP
PEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTAIPTTTASTAAPTTATGPP
VVPPTPAAVAAAPPAAAPTASPPPQTPFGFPGDGMQPPAYTQHQNMDPFQPRMMGIQDPA
HHQVPLPPNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQPFPASFQAQNEPLTQKAHPQE
MEVEQPCIQEVKRHMSDNRKSRSRSASRSPKRRRSRSSSRTRRSRHRRSRSRSRDRRRHS
PRSRSQERRDREKERERRQKGLPQIKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGP
IESINMIPPRGCAYIVMVHRHDAYRALQKLSRGNYKVNQKSIKIAWALNKGIKPDYKQYW
DVELGVTYIPWDKVKPEELEGFCEGGMLDSDTLNPDWKGIPKKPENEVAQNGGAETSHTE
PVSPIPKALPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPTFTPPLGIPPPGFGP
GVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINE
DTTKDLSIGNPIPTVVSGARGSAETGDSVKMYGSAVPPAAPTSLPTPPVTQPVSLLGTQG
VAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMPRGPPPG
PGGFGMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGGPEDRDGRQQPPPQQQQPQQQPP
PQPPPPSQQPPPSQQPPQPFRNDNRQQFNSGRDQERFGRRAFGNRVENDRERYGNRNEER
ENSNRERRDWGRRSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRREKEEIRGKDKPEV
TDRAGGNKTAEPPISQVGNVDTLSELKGEAEAPVKPPEESPAEATLSSVEPEKDSGSAAD
APR
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgtcaacgccttcaaccaggagctcttttcccttatggatatgaaacctccc
atctctcgagccaagatgattctcatcactaaagctgctattaaagctattaagctttat
aagcatgtagttcaaatagtagaaaagttcatcaaaaagtgtaaaccagaatacaaagtt
ccaggattatatgtaattgactcaattgtgagacagtctcgtcatcagtttggaactgac
aaagatgtttttgggccaagattctcaaaaaacataactgctacattccaatatttatac
ctttgtccatctgaagataagagtaaaatagttcgagtactaaatctttggcaaaaaaat
ggagtatttaaaattgaaattattcaacctcttttggacatggcagcaggaaccagtaat
gccgccccagtagcagaaaatgttactaataatgaaggttcacctccacctcctgtaaaa
gtttcttctgaaccccctcaagtcactactaactccataccagctgtgccacagttgccc
agctctgatgcgtttgctgctgtggcccaactgtttcagactactcaagggcagcagctt
cagcagatccttcagacttttcagcaacctccaaaaccacaatctcccgccattgacaat
gctgtgatggctcaggttcaagctatcacagctcagttaaagacagctcctacacagcca
cctgaacaaaaagctgctttccccccacctgaacaaaaaactgcatttgacaagaagctg
cttgacagatttgattatgatgatgagccagaagctgtagaagaatcaaagaaagaagac
actgctatccctaccactactgcctccactgctgctcccaccacagccaccgggcctcct
gttgtgcctcctactcctgctgctgttgccgctgccccccctgctgctgcccccacagct
tctcctcctccacagaccccatttggatttcctggtgatggtatgcaaccgccagcatat
acgcaacatcaaaatatggatccatttcagccccgaatgatggggatacaagatccagcg
caccatcaggttccacttccccctaatggacagatgccaggatttggacttcttcctact
cctcctttccctcccatggctcagcctgtgatccccccaacgccaccagtgcagcagcct
ttcccagcttcctttcaggctcagaacgaaccgcttacgcagaaggcacatccgcaggaa
atggaagtagaacaaccttgtattcaagaagttaagcgccatatgtctgataacagaaaa
tcaagatctaggtcagcatccagatcaccaaagagaaggcgctctaggtctagttctcgg
acgcgaagatctcggcatcggcgttcgcgatccagatccagggatagacggcgacactct
ccgagatctcggtcccaagaaagacgagatcgagaaaaagagagggagcgccgacaaaag
ggcctccctcaaatcaaaccggaaactgcaagtgtttgtagtactaccctctgggtggga
cagctggacaaaaggacaactcagcaggatgttgccagtctcttggaagagtttggtccg
attgagtcaattaatatgattcctccccggggttgtgcctatattgtcatggttcatcgg
catgatgcttatcgggccctgcagaaactgagccgaggaaactataaagtgaaccagaaa
tccataaagattgcctgggccttaaacaaaggaataaagccagattataagcagtattgg
gatgtagaacttggtgttacgtatattccatgggacaaagtcaaacctgaggagctggag
ggtttttgtgaaggagggatgctcgacagtgacacgcttaacccagattggaaaggaatt
cccaagaaacctgaaaatgaagttgctcaaaatggaggtgcagaaacctcacacacagaa
ccagtatcacccatacctaaagctttgcctgttcctgtccctccgattcctgtccctgca
cctataacagtacctcctccacaggtcccaccccatcagccgggtcctcctgtagttggt
gcactccagccacctactttcacacctcctttgggaattccccctccaggctttggtcct
ggtgttcctccaccaccaccaccaccaccgttcttgcgcccaggattcaacccaatgcat
ttaccaccaggttttcttcctcctggacccccacctcctataacaccaccagtatccatt
cctcctcctcacactccaccaatcagcatcccaaactctactatcgctggtataaatgaa
gacactacaaaagacttatctattggaaatcccattccaacagtggtgtctggggctaga
ggaagtgccgagactggtgacagtgtgaaaatgtatggctctgcggtgccacctgctgct
cccacaagtctgcctacgccgccagtaacccagcctgtttcacttcttggcacgcaagga
gttgcacctggtcctgtgattgggctccaagcaccgtctactggtcttcttggtgcccgc
cccggcctgatcccgctccagcgccctccaggaatgcctccccctcatctccagcgattt
cctttgatgccaccacgccctatgcccccacatatgatgcccagaggcccaccaccagga
ccagggggctttgggatgcctccacctcacggaatgaaaggtccctttccacctcatggc
ccctttgttaggcctgggggaatgccagggcttgggggtccaggcccaggcggccctgaa
gacagagatggaaggcagcagccgcccccgcagcagcagcagccccagcagcagccacca
ccacagccaccgccgccatcacagcagccgccgccctcgcagcagccaccacagccgttt
agaaacgacaataggcagcagttcaattcaggtagagatcaagaaaggtttggacgaaga
gcttttggaaatagggtggaaaatgaccgggaacggtatgggaaccgtaatgaggagaga
gagaacagtaatcgtgaaaggagagattggggaaggaggagccctgaccgagacaggcac
agagacttggaagagagaaatagacgctctagtgggcatcgagaccgagagagagattct
agagatagagagtcacgtagagagaaagaggaaatccgaggaaaggacaagcctgaggtg
acagacagggcaggtggtaacaaaaccgctgaacctcccattagccaagtgggaaatgta
gacaccctttcagaacttaagggagaggccgaggcaccagtcaaaccgcctgaagagtca
cctgctgaggctaccttgtcttcggttgaacctgagaaggattctggctcagcagcagac
gctcctcgctga
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