Echinops telfairi (small Madagascar hedgehog): 101663270
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Entry
101663270 CDS
T08707
Symbol
TRPV1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf04080
Neuroactive ligand-receptor interaction
etf04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
101663270 (TRPV1)
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
101663270 (TRPV1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
etf04040
]
101663270 (TRPV1)
Ion channels [BR:
etf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
101663270 (TRPV1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_3
Ank_5
Ank_4
PKD_channel
Motif
Other DBs
NCBI-GeneID:
101663270
NCBI-ProteinID:
XP_045149274
LinkDB
All DBs
Position
Unknown
AA seq
779 aa
AA seq
DB search
MKKWGSSDSGESEDPPQEATLPNPNSKSPAVKLPILKVKCRPRLFGKGDSEEASHMDSSY
EEGQGAFCPAITVSSAVLLPGPGDGPACVRQLSQDPAPAGPEKALYDRRRIFEAVAQNNC
EELESLLLFLQKSEKHLMDSEFKDPETGKTCLLKAMLNLHDGHNDTIPLLLEIARQTNSL
KELVNASYTDSYYKGQTALHIAIERRNMALVTLLVENGADVQAAANGDFFKKTKGRPGFY
FGELPLSLAACTNQLGIVKFLLQNSWQPADLCARDSVGNTVLHALVEVADNTADNTKFVT
SMYNEILILGAKLHPTLKLEELVNRKGLTPLSLAASTGKIGVLAYILQREIQEPECRHLS
RKFTEWAYGPVHSSLYDLSCIDTCEKNSVLEVIAYSSSETPPPFKLNNTKDYFRVTGEIL
SVFGGVYFFSRGIQYFLQRRPSLKTLFVDSYSEMLFFVQSVCILGTVALYFCQRKEYVAS
MVFSLAMGWTNMLYYTRGFQQMGIYAVMIEKMILRDLCRFMFVYLVFLFGFSTAIVTLIE
DGKNGSVQAEPIPNRWQRPGSRGTNSSYNNLYSTCLELFKFTIGMGDLEFTENYEFKPVF
IMLLLSYVILTYILLLNMLIALMGETVNKISQESKNIWKLQRAITILDTEKSFLKCMRKA
FRSGKLLQVGYTPDGKDDYRWCFRVDEVNWTTWNTNVGIINEDPGNCKGIKRTLSFSLRP
HRVSGRNWKNFALVPLLRDASTRERPAVQPEEVHLRHFAGSLKPEDAEVSRDSVVFRQK
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatggggtagctcagactctggggagtcggaggacccaccccaggaggctacc
ttgccaaaccctaactccaagtcacctgcagtcaagctgcccatcctcaaggtcaagtgt
cggccccggctctttgggaagggtgactccgaggaggcttcccacatggacagctcttac
gaggaaggccagggtgccttctgcccagccatcaccgtcagctctgctgtcctcctcccg
gggcctggggatggccccgcctgtgtcaggcagctctctcaggaccctgcccccgcgggc
cccgagaaggctctctacgatcgcaggaggatctttgaagcggtcgctcagaataactgt
gaggagctggagagcctgctgctcttcctgcagaagagcgagaagcacctcatggacagc
gagttcaaagacccggagacagggaagacgtgcttgttaaaagccatgctcaacctccat
gatgggcacaatgacaccatccccctgctgctggagatagcgcggcagaccaacagcctg
aaggagctggtcaacgccagctacacggacagctactacaagggccagacagcgctccac
attgccatcgagaggcggaacatggcgctagtgaccctgctggtggagaatggggcagat
gtccaggcagcggccaacggggacttctttaagaaaaccaaaggacggcctggcttctac
tttggtgagctgccactctccctggctgcatgcactaaccagctgggcatcgtgaagttc
ctgctgcagaactcctggcagccggccgacctctgcgctcgggactcggtgggcaacacc
gtgctgcacgccctggtggaggtggccgacaacaccgccgacaacaccaagtttgtgaca
agcatgtacaacgagatcctcatcctgggggccaagctccacccaacgctgaagctggag
gagctcgtcaacaggaaggggctgacgccgctgtcgctggccgccagtaccgggaagatc
ggggtattggcctatattctgcagagggagatccaggagcccgagtgcaggcacctgtcg
aggaagttcacggaatgggcctacgggcccgtgcactcttcactctacgacctgtcctgc
atcgacacctgtgagaagaactcggtgctcgaggtgatcgcctacagcagcagtgagacc
cctcctccgttcaagctgaataacaccaaagactatttccgagtcactggagagattctg
tctgtgttcgggggtgtctacttcttctcccgagggattcagtatttcctgcagaggcgg
ccttcactgaagaccttgtttgtggacagctacagtgagatgcttttcttcgtgcagtcc
gtgtgcatccttgggacggtggcgctgtacttctgccagcgcaaggagtatgtggcctcc
atggtgttctccctcgccatgggctggaccaacatgctctactacacccgcggcttccag
cagatgggcatctacgctgttatgattgagaagatgatcctgagagacctgtgtcgcttc
atgttcgtctacctcgttttcttgttcgggttttccacagcaattgtgacgctgatagag
gatgggaagaatggctctgtgcaggctgagcccatacccaacaggtggcagcgacctggt
tcccgggggactaacagctcttacaacaacctgtactccacgtgtctggagctgttcaag
ttcaccatcggtatgggcgacctggagttcacggagaactacgaattcaagcctgtcttc
atcatgctgctgctgtcctatgtgatcctcacctacatcctgctgctcaacatgcttatc
gccctcatgggcgagactgtcaacaagatctcgcaggagagcaagaatatctggaagctg
cagagagccatcaccatcctggacacagagaagagcttcctgaaatgtatgaggaaagcc
ttccgctcgggcaagctcctgcaggtggggtacacacctgatggcaaggatgactacagg
tggtgtttcagggtggatgaagtgaactggaccacatggaacaccaatgtgggcattatc
aatgaagaccccggcaactgtaaaggcatcaagcgcaccctgagcttctccctgcggcct
cacagagtttcagggagaaattggaagaactttgccttggtccccctcttgagagatgca
agtactcgagaaaggcctgccgtccagccggaggaggttcacctgaggcacttcgctggg
tccctcaagccagaagatgctgaggtctccagggattctgttgttttcaggcagaagtga
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