Echinops telfairi (small Madagascar hedgehog): 101663328
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Entry
101663328 CDS
T08707
Symbol
ATXN2
Name
(RefSeq) ataxin-2 isoform X3
KO
K23625
ataxin 2/2L
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf05014
Amyotrophic lateral sclerosis
etf05017
Spinocerebellar ataxia
etf05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101663328 (ATXN2)
05017 Spinocerebellar ataxia
101663328 (ATXN2)
05022 Pathways of neurodegeneration - multiple diseases
101663328 (ATXN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etf03019
]
101663328 (ATXN2)
Messenger RNA biogenesis [BR:
etf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
101663328 (ATXN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
LSM
Motif
Other DBs
NCBI-GeneID:
101663328
NCBI-ProteinID:
XP_030743335
LinkDB
All DBs
Position
Unknown
AA seq
1049 aa
AA seq
DB search
MRMVHILTSVVGSKCEVQVKNGGIYEGVFKTYSPKCDLVLDAAHEKSTESSSGPKLEEIM
ESILFKCSDFVMVQFKDMDSSYARRDAFTDSALSAKVNGEHKEKDLEPWDAGELATTAEE
LEALENDVSNGWDPNDMFRYNEENYGVVSTYDSSLSSYTVPLERDNSEEFLKREARANQL
AEEIESSAQYKARVALENDDRSEEEKYTAVQRNSSEREGHSMNTRENKYIPPGQRNREVI
SWGSGRQNSPRMSQQGSASMSSRATSHTSDFNPNSGSDQRVVNGGVPWPSPCPSPSSRPP
SRYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPSAHGSPAPVSTVPKRMSSEGPPRMS
PKAQRHPRNHRVSAGRGSISSGLEFVPHNVPSEAATPPVARTSPAGGTWSAVVSGVPRLS
PKTHRPRSPRQSSIGNTPSGPVLASPQAGTIPTEAVAMPVPAASPAPASPASNRAVTPST
EAKDSRLQDQRQNSPAGNKEISKPSEAAASFSKAENKGISPIVSEHRKQIDDLKKFKNDF
RLQPSSDSVDLLLNKNREGEKSRDSIKDKTEPSTKESFLESNSSTCTSGSSKPSSPSASP
SIISNSEYKRGPEVTSQGVQTSSPGCKPEKDDKEEKKDAAEQVRKSTLNPNAKEFNPRSF
SQPKPSTTPTSPRPQAQPSPSMVGHQQPTPVYTQPVCFAPNMMYPVPVSPGVQPLYPIPM
TPMPVNQAKAYRAGKVPNMPQQRQDQHPQSSMMHPASAAGPPIVATPPAYSTQYVAYSPQ
QFPNQPLVQHVPHYQSQHPHVYSPVIQGNARMMAPPAHAQPALVSSSATQYGAHEQTHAM
YACPKSPYTKETSPSFYFAISTGSLAQQYAHPNATLHPHTPHPQPSATPTGQQQSQHGGS
HPAPSPVQHHQHQAAQALHLASPQQQSAIYHAGLAPTPPSMTPASNTQSPQNSFPTAQQT
VFTIHPSHVQPAYTNPPHMAHVPQAHVQSGMVPSHPTAHAPMMLMTTQPPGGPQAALAQS
ALQPIPVSTTAPFPYMTHPSVQAHHQQQL
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgaggatggtccatattcttacatcagttgttggctccaaatgtgaagtacaagtgaag
aatggaggtatatatgaaggagtttttaaaacgtacagccctaagtgtgatttggtactt
gatgctgcccacgagaaaagtacagaatccagttcggggccaaaacttgaagaaatcatg
gagagtattctgttcaagtgttcagactttgttatggttcagtttaaggatatggactct
agttacgcacgaagagatgcttttactgactctgctctcagtgctaaagtgaacggggaa
cacaaggaaaaggacctggagccatgggatgccggcgaactcgccaccactgctgaggag
ctggaggctctggagaacgacgtgtctaatggatgggaccccaatgatatgtttcgatat
aatgaagaaaattacggtgtagtgtctacgtatgatagcagtttatcttcatatacggtg
cccttggaaagagataactctgaagaatttttaaaacgggaagcaagggcaaaccagtta
gcagaagaaatcgaatcaagtgcacagtacaaagctcgggtggccctggaaaatgacgac
aggagtgaggaagaaaaatacacagctgttcagagaaattccagtgaacgagaggggcac
agcatgaacaccagggaaaataaatatattcctcctggacaaagaaacagagaagtcata
tcctggggaagtgggagacagaattcaccgaggatgagccagcaaggatcggcctccatg
tcatcgagagccacctcacacacttcagatttcaacccgaattctggttcagaccaaaga
gtagttaatggaggtgttccctggccatcgccttgcccatctccttcctctcgcccacct
tctcgctaccagtcaggtcccaactctcttccacctcgggcagccacccctacacggccg
ccctccaggcccccctcgcggccatccagacccccgtctcacccctctgctcatggttct
ccagctcctgtctctactgtgcctaaacgcatgtcttcagaagggcctccaaggatgtcc
ccaaaggctcagcgacaccctcgaaatcacagagtttctgctgggaggggttcgatttcc
agtggcctagaatttgtaccccacaacgtgcccagtgaagcagctactcctccagtggcg
aggaccagccccgcagggggcacctggtcagcagtggtcagtggggttccacggttatcc
cctaaaactcacagacccaggtctcctagacagagcagtattggaaatactcccagtggg
ccagtccttgcttctccccaagctggtaccattccgacagaagctgttgccatgcctgtg
cccgctgcctcgcctgcacctgccagcccagcatccaacagagcggtcaccccgtctact
gaggctaaagattccaggctccaagaccagaggcagaactctcctgcagggaataaagaa
attagcaagcccagtgaggcagcagctagtttttcaaaagctgaaaataaaggtatttca
ccaattgtttctgaacacagaaaacagatcgatgatttaaagaaatttaagaacgatttt
aggttacagccgagttctgattctgtggatctactgttaaacaaaaatagagagggagaa
aaatcaagagatagcatcaaagacaaaactgagcccagcactaaggagtccttccttgag
agcaacagcagcacctgcaccagtggaagcagcaagcccagcagccccagcgcgtcccct
tcgataattagcaactctgaatacaaaagggggccggaggtcacgtcccagggggtgcag
acgtctagtcctgggtgcaaaccagagaaagatgacaaagaagagaagaaagacgcagca
gagcaagttaggaaatccacattgaaccccaatgcaaaggagttcaatcctcggtccttt
tctcagccaaagccttccacaaccccaacttcacctcggcctcaagcacaaccgagtcca
tccatggtgggccatcagcagccaactccagtctatacgcaacctgtttgttttgcacca
aatatgatgtatccagtcccagtaagcccaggcgtacagcctttgtacccaatacccatg
acgcccatgcccgtgaaccaagccaaggcctatagagcaggtaaagtaccaaatatgccc
cagcagcggcaggaccagcacccccagagcagcatgatgcacccagcctccgcagcaggc
ccacccattgttgctacccctccagcctattccacacagtacgttgcctacagccctcag
cagtttccaaatcaacctcttgttcagcacgtgccacattatcagtctcagcatcctcat
gtctatagtcctgtcattcagggtaacgcccggatgatggcacccccagcacatgcccag
cctgcgctcgtgtcgtcttcagcaactcagtacggggctcatgagcagacacatgcgatg
tatgcatgtcccaaatcaccatacaccaaggagacaagcccttctttctactttgccatt
tccaccggctcccttgcccagcagtatgcacaccccaacgccaccctgcacccacacacg
ccacatcctcagccctcggccacccccactggacagcagcaaagtcagcatggtgggagt
caccctgccccaagccctgttcagcaccatcagcaccaggcggcccaggccctccatctg
gccagtccacagcagcagtcggccatctaccatgcggggctcgcgccaacacccccctcc
atgacaccagcctccaacacgcagtcaccacaaaacagcttcccaacagcacaacaaact
gtctttacgatccatccttcccacgttcagccggcgtacaccaacccaccccacatggcc
catgtacctcaggctcatgtacagtcaggaatggttccttctcatccaactgcccatgcg
ccaatgatgctaatgacgacacagccacccggcggtccccaggccgccctcgctcaaagt
gcactacaacccattccagtctcgacaacagcgcctttcccctatatgacgcacccttca
gtacaagcccaccaccaacagcagctgtaa
DBGET
integrated database retrieval system
