Echinops telfairi (small Madagascar hedgehog): 101663481
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Entry
101663481 CDS
T08707
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X2
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
etf03000
]
101663481 (RC3H2)
04121 Ubiquitin system [BR:
etf04121
]
101663481 (RC3H2)
Transcription factors [BR:
etf03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
101663481 (RC3H2)
Ubiquitin system [BR:
etf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101663481 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf-C3HC4_3
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-CCCH_UNK
zf-C3HC4_4
zf-C3HC4_2
Xin
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
101663481
NCBI-ProteinID:
XP_030741485
UniProt:
A0ABM1VJX5
LinkDB
All DBs
Position
Unknown
AA seq
1185 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQSIKLSSNLGENKHYEVAKKCSITLKPFNAGRSVASLNQ
SALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANLWAA
VRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIGHVV
QLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQWSSL
LYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANIDPN
PDAVSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHEAPQPQPNSKYKTSMCRDLRQQG
GCPRGTNCTFAHSQEELEKYRLRNKKINATVRTFPLLNKGGVNHTVPSTAGNVISVIGST
EPTGKMVPSANGISNAENSVSPLIPRSTDNTLRVLETVKKVGKVVTNGQNAAGPTAESVT
ENKIGSPPKTPVSNVAATSAGPLSVGTELNSVPPKSSPFVTRVPLYPQHSENIQYFQDPR
TQIPFEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASVPYVDHYSTFSP
RDRMNSSPYQPPPQPFGPVPPVPSGMYAPVYDSRRIWRPPMYQRDDIIRSNSLPPMDMMH
SSVYQTPLRERYNSLDGYYSVACQPPSEPRTTVPLPREPCGHLKTSYEEQIRRKPEQWAQ
YHTQKAPLVSSTLPVATQSPTPPSPLLSVDFRSDFSESVSGTKFEEDHLSHYSPWSCGTI
GSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVHLFETQRRTKEEDPIIPFSDGPIISK
WGAISRSSRTGYHTTDPVQATASQGSATKPISVSDYVPYVNAVDSRWSSYGNEATSSAHY
IERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLDEGRHL
ALNLLSKEIELRNGENDYTEDATDTKPDRDIELELSALDTDEPDGQGEQIEEILDIQLGI
SSQNDQLMNGTAVENGHPVQQHQKEPLEQKRQSLGEDHVILEEQKTVLPVTSCFSQPHPV
SIGNASCLPITTSASVGSLILKTHVMSEDKNDFLKPVTNGKMVNS
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcaatggacagagtttctgtcctgtccaatctgctataatgag
tttgatgagaatgtgcacaaacccatcagtttaggttgctcgcacacggtttgcaagacc
tgcctgaataaacttcaccggaaagcttgtccttttgaccagactgccatcaacacagac
attgatgtacttcccgtcaattttgcacttctccagttagttggagcccaggtaccagat
catcagtcaataaagttgagtagtaatctaggtgagaacaaacactatgaggttgcaaag
aaatgttcgatcacacttaaaccttttaacgcagggagaagtgtagctagtttgaatcag
agtgcactgagccgaccaatgcaaaggaagctggtgacacttgtcaactgccagctggtg
gaggaagaaggtcgcgtaagagccatgcgagcagcccgttcacttggagaaagaactgta
acagaactgatattacagcatcagaaccctcagcagctgtctgccaacctatgggctgct
gttagggctcgaggatgtcagtttctagggccagctatgcaagaagaagccttgaaactg
gtgttgctggcattagaagatggttctgccctctcaaggaaagttctggtactttttgtt
gtacaaaggctagaaccaagatttcctcaggcatcaaaaacgagtattggtcatgttgtg
caactattgtatcgagcatcttgttttaaggtcaccaaaagggatgaagactcttctctg
atgcaactaaaggaggaatttcggagttacgaggcgttacgcagagaacatgatgcacag
attgtccacattgctatggaagcaggacttcgcatttcacccgagcagtggtcctccctt
ctgtatggtgacctagcacataaatcacacatgcaatctatcattgataagctccagtct
ccagaatcatttgcaaagagtgtccaggaattgacaattgttttgcaacgtacaggtgac
ccggctaacttaaatagactgagacctcatttagagcttcttgcaaacatagatcctaac
ccagatgccgtttcgccaacatgggagcaacttgaaaatgcgatggtagctgttaaaaca
gtggttcatggacttgtagatttcatacagaattacagtagaaaaggccatgaagcacct
cagccccagccaaacagtaaatacaagactagcatgtgccgagatctacgacagcaaggg
gggtgtccacgaggaacaaattgtacatttgcccattctcaggaagaacttgaaaagtat
cgattacggaacaaaaagatcaatgcgactgtaaggacgtttcctcttctaaataaaggt
ggtgtaaaccacactgtcccaagcacagccggaaatgtcatttctgtcataggaagtact
gaaccaacggggaaaatggttccaagtgcaaatggaatttcaaatgcagaaaacagtgtt
tccccactaatcccacgtagtactgataatacactgagagttctggagactgtgaagaaa
gttgggaaagttgtaactaatggtcagaatgctgctgggcccactgcagagtctgtaact
gaaaataaaattggttctccacccaagactcctgtaagtaatgtagcagctacctcagct
gggccccttagtgttggaacagagctgaactctgtgcctcccaaatccagcccatttgta
actagagtaccactatatcctcagcattctgaaaacattcagtattttcaagatccaagg
actcagataccctttgaagttccacaatacccacagacaggatactatccaccacctcca
acggtaccagctggtgtggctccttgtgttcctcgctttgtgaggtccaataacgttcca
gagtcctccctcccacctgcttccgtgccatatgtcgatcattacagcacattttcccct
cgagatcgaatgaattcttctccctaccaacctcctccacagccgtttggaccagttcct
ccagttccttctggaatgtacgctcctgtgtatgacagcaggcgcatctggcgcccacct
atgtaccaacgagatgacattattagaagtaattctttacctccaatggatatgatgcac
tcgtctgtctatcagactcctttacgggaaagatataactcactagatgggtattactca
gtggcttgtcagccaccaagtgagccaaggacaactgtgcctttaccaagggaaccttgt
ggtcatttgaagaccagttatgaggagcaaataagaagaaagccagagcagtgggcacag
taccacactcagaaggcgcctcttgtctcttcaactcttcctgtggctacccagtcgcca
acaccgccttctcctctactcagtgtagactttcgctctgatttctccgagagtgtgagt
ggtacaaaatttgaagaagatcatctttcccattactctccctggtcttgtggtaccata
ggctcctgtataaatgccatcgattcagagcccaaagatgtaattgctaattcaaatgcc
gtgttaatggacttggacagcggagatgttaagagaagagtacatttatttgaaactcag
agaaggacaaaagaagaagacccaatcattccttttagtgatggacctatcatctcaaaa
tggggtgcgatttccagatcttctcgtacaggctaccataccacagatcccgtccaggcc
actgcttcccaaggaagtgcgactaaacccatcagtgtgtcagattatgttccttatgtt
aatgctgttgattcaagatggagttcatatggcaatgaggcgacgtcctcagcacactac
attgaacgggacagattcattgttactgatttatccggtcatagaaagcattccagtact
ggagaccttttgagcattgaacttcagcaggccaagagtaactcattgcttcttcagagg
gaggccaatgcgctggccatgcaacagaagtggaattccctagatgagggtcgtcacctt
gctttaaatcttctaagcaaggaaattgagttaagaaatggagagaatgattatacagaa
gatgcaacagatacaaagcctgatagggatattgaattagagctttcagcacttgataca
gatgagcctgatggacaaggtgaacaaattgaagagatccttgacatacaacttggtatc
agttctcaaaatgatcagttgatgaatggaacagcagtggaaaatggacatccagtccag
cagcaccaaaaggagccactagagcagaagagacagagtttaggtgaagaccatgtgatt
ctggaggagcaaaaaacagttctgccggtaacttcttgctttagccaaccccatccagtg
tccattggcaatgcaagttgcctccccatcaccacatccgccagtgttggcagcctcatt
ctgaaaactcatgttatgtctgaggataaaaatgactttttaaaacctgttacaaatggg
aagatggttaacagctga
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