Echinops telfairi (small Madagascar hedgehog): 101663542
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Entry
101663542 CDS
T08707
Symbol
USH1C
Name
(RefSeq) harmonin isoform X1
KO
K21877
harmonin
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
etf03037
]
101663542 (USH1C)
Cilium and associated proteins [BR:
etf03037
]
Primary cilia and associated proteins
USH complex and associated proteins
101663542 (USH1C)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
USH1C_N
PDZ
PDZ_6
PDZ_2
Baculo_LEF5_C
Saw1
Motif
Other DBs
NCBI-GeneID:
101663542
NCBI-ProteinID:
XP_004711633
UniProt:
A0ABM0IZR2
LinkDB
All DBs
Position
Unknown
AA seq
550 aa
AA seq
DB search
MDRKVAREFRHKVDFLIENDAEKDYLYDVLRMYHQTMDVAVLVGDLKLVINEPSRLPLFD
AIRPLIPLKHQVEYDQLTPRRSRKLKEVRLDRLHPEGLGLSVRGGLEFGCGLFISHLIKG
GQADSIGLQVGDEIVRINGYSISSCTHEEVINLIRTKKTVSIKVRHIGLIPVKSSPDETL
KWQYVDQFVSESGGGQGMLGSSGSQEHKEKKVFISLVGSRGLGCSISSGPIQKPGIFISH
VKPGSLSAEVGLETGDQIVEVNGIDFSNLDHKEAVNILKGSRSLTISIVAGAGRELFLTD
RERLAEVRQHELQRQELLMQKKLAMESNKILQEQQETERQRKKEIAQKAAEENERYRKEM
EQIVEDEEKFRKQWEEDWGSKEQLLMPKTITAEVHPIPLRKPKYDQGLESQLEPAEEPDG
GSEEQGTQDFRKYEESFDPYSMFTPEQILGKDVRLLRIKKEGALDLALEGGVDSPIGKVV
VSAVYEGGAAERHGGIVKGDEIMAINGKIVTGYTLAEAEAALQKAWSGDWIDLVVAICPP
KEYDDELTFF
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggacaggaaagtggcccgggaattccgccataaggtggattttctgattgagaatgac
gccgagaaggactatctttatgacgtgctgcggatgtaccaccagaccatggatgtggct
gtgctggtgggagacctgaagctggtcatcaatgagcccagccgcctgccactgtttgat
gccatccggcccctgattccgctgaagcaccaggtggagtacgaccagctcaccccgagg
cgctccaggaagctgaaggaggtccgcctcgaccggctgcaccccgaaggcctcggtctc
agtgtgcgcggtggcctggagtttggctgcggtctctttatttcccacctcatcaaaggc
ggccaggccgacagcattgggctccaggttggggatgagattgtccggatcaatggctat
tccatctcctcctgcacccacgaggaagtcatcaacctcatccgtaccaagaagactgtg
tccatcaaagtgagacacatcggcctgatccctgtgaagagctctcctgatgagaccctc
aaatggcagtatgtggatcagtttgtgtcggaatctgggggcgggcaggggatgctgggc
tcctccgggagtcaggagcacaaagagaagaaggttttcatcagcctggtgggctcccgg
ggccttggctgcagcatttccagcggccccatccagaaacccggcatcttcatcagccac
gtgaagcctggctccctgtctgccgaggttgggttggagacaggggaccagattgtcgag
gtcaatggcatcgacttctctaacctggaccacaaggaggctgtgaacatactgaagggc
agccgcagcctgaccatctccatcgtcgcaggggcaggccgggaactgttcctgactgac
cgggagcggctggcagaggtgcggcagcacgagctgcagcggcaggagcttctgatgcag
aagaagctggcgatggagtccaacaagatcctgcaggagcagcaggagacggagaggcaa
aggaaaaaggaaattgcccagaaggcagcagaggaaaatgagagataccggaaggagatg
gaacagatcgtggaggatgaagagaagtttaggaagcagtgggaagaagactggggctca
aaggaacagctgctcatgcccaaaaccatcaccgccgaagtgcacccgataccccttcgc
aagccaaagtatgaccagggcctggagtcccagcttgagcccgcagaggagccagacgga
ggctcagaggagcagggaacgcaggatttccggaaatatgaggaaagttttgatccctac
tcaatgttcacgcccgagcagatcctagggaaagatgtccggctcctgcgcattaagaag
gagggagccttagacctggccctggaaggcggtgtggactcccctatcgggaaggtggtg
gtctcagctgtttacgaggggggagccgctgagcggcatggtggcattgtgaagggggac
gagatcatggcaatcaacggcaagatcgtgactggctacaccctagccgaggcggaggct
gccctgcagaaggcctggagcggagactggattgaccttgtggtggccatctgccctccc
aaggagtacgatgatgagctgaccttcttctga
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