Echinops telfairi (small Madagascar hedgehog): 101663655
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Entry
101663655 CDS
T08707
Symbol
PCDH12
Name
(RefSeq) protocadherin-12
KO
K16499
protocadherin delta 2
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
etf04515
]
101663655 (PCDH12)
Cell adhesion molecules [BR:
etf04515
]
Cadherins
Protocadherins
101663655 (PCDH12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
Glycophorin_A
Motif
Other DBs
NCBI-GeneID:
101663655
NCBI-ProteinID:
XP_004697115
LinkDB
All DBs
Position
Unknown
AA seq
1198 aa
AA seq
DB search
MTQLLPLLLGLWGPGGYLFLSGDCQGVATLTVTYQVAEEVPRGTVIGKLAQDLGRVEQRK
GPIGGPFRALHPPRVLHPPRVVYPPRVLNIEVMAEEGMLSTMGRLDREQLCPQQDPCLAS
FDLIALKHSALIHVQIQVLDINDHQPQFPKDKQELEISESASLDTRIPLDRAVDPDTGPN
TLHLYTLSPSEHFALNIIVGPDETKYAELVVIKELDREIHSFFDLVLTAYDNGDPPKSGT
CLIKVNVLDSNDNSPVFAESLVALEIQEDTVPGTLLINLTATDPDLGPNGEVEFSLGKHM
PTEVLQTFSIEAKTGRLVLRQPLDYEEKPVYEVDVQAKDLGPNPIPSHCKVLIKVLDIND
NAPSIHITWASEAPLVSEALPKDSLIALITANDLDSGNNGLVHCWLNQELDHFRLNRTNG
NTYMLLTDATLDREQWPDYTLTLLAQDQGSQPLSDKKQLSIQISDVNDNAPVFEKSRYEV
STRENNLPSLHLITVQAHDGDLGNNGKISYRIQDSPVSHLVAIDADTGEVTAQRALDYEQ
MTSIEFQVIAEDRGQPQLASSVSMWVSLLDVNDNAPEVIQPVLSNGKASLSVLVNASTGH
LLVPIETPSGLDPRGAGMLPVAPRIPPPFFLVTIVARDADSGANGELHYSIRRGNKAYLF
VLSPDLGQLFINVTNASSLIGSEWELEIEVEDRGSPPLQTQVLLKVMFVTSVDHLRDLAP
DQGALSTVVLTVICLAVLLAIFGLILALVMSIRRTEKKDSQAYNCREAESTYRHQPKRPQ
KHIQKTDIHLVPVLRGQVEEPCEVGQPHKDPSQEANAGEGWDPCLQAPFHLTPTLYRTLR
NRGNLGALDESQEVLQDTVHLLFNHPRQRNASRENLNLLEPHPAVGQPRSRPLKVAGSPV
GTLPRDQGIGEAPQSPTASSATLRRKRGLHAKVAPEKESGPRQILRSLVRLSVAAFAERN
PMEELTVDSPPVQQISQLLSLLHQGQFQPKPNHRGNKYSSKPAGGGRSAVPDTDGPGASM
GGQARLDQEDGLLDSEEDLSVKQLLEEELSSLLDPHTGLDLNRLSAPDPAWMARLSLPLA
TNYRDNVCSADASASSEAPRTFQTFGKAAGPELSPAGTRLASTFVSEMSSLLEMLLAQRS
SVVPVEAASEALRRLSVCGRTLSLDLATSGASGTEAQGPAAGKKGRASSSSSSSSRGL
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgactcaacttctgccgcttctgctggggctttgggggccaggtggctatttgtttctt
tcaggggattgtcagggagtagccactctcactgtgacctaccaagtagccgaggaagtg
ccacgcgggacggtgatagggaagctggcccaggacctgggccgggtggagcagcggaag
ggccccatagggggtcccttccgggccttgcatccgcctcgggtcttgcatccgcctcgg
gtcgtgtatccgcctcgggtgctcaacattgaggtgatggccgaggaaggcatgctcagc
acaatggggcggctggaccgggagcagctctgcccacagcaggacccctgcctggcttcc
tttgacctgattgcgctcaagcattccgccctgatccatgtccagatccaggtgctggac
atcaatgaccaccagccccagttccccaaggacaagcaggagctagaaatctccgagagt
gcctctctggacacccggatccctctggacagggccgttgacccagacacaggccccaac
acgctgcacttgtacaccctgtctcccagtgagcactttgccctgaatatcatcgtgggg
cccgatgagaccaagtatgctgagctcgtggtgatcaaggagctggaccgggaaatccac
tcgttttttgacctggtcctaactgcctatgacaacggggacccccccaagtcgggtacc
tgcttgatcaaggtcaacgtcctagactccaatgacaacagccctgtgtttgctgagagc
ttggtggcactggaaatccaagaagacactgtccctggtaccctcctcatcaacctgact
gccacggaccctgacctaggccccaacggggaggtggagttttccctgggcaagcacatg
cctacagaggtgctgcaaaccttcagtatcgaggccaagacgggccggcttgttctgcgt
caaccactagattacgaggagaaaccggtctacgaggtggatgtccaggcgaaagacctg
gggcccaatcccatcccatcccactgcaaagttctcatcaaagttctggacatcaatgac
aatgccccgagcatccacatcacgtgggcctctgaggcaccactggtgtccgaagctctt
cccaaagacagcctgatcgctctcatcacagcaaacgacttggattcgggaaacaacggc
ttggtccactgttggctcaaccaagagctagaccacttcaggctgaacaggaccaacggc
aatacatacatgctgctaacggatgccacgctggacagagagcagtggccggattatact
ctcactctgttagcccaagaccaaggatcccagcccttgtctgacaagaagcaactcagc
attcagatcagcgatgtcaatgataacgcccctgtgtttgagaagagcaggtatgaggtc
tccacgcgagaaaacaacctaccttctcttcacctcatcactgtccaggctcatgatgga
gacttgggcaacaatgggaaaatctcgtaccgcatccaggactccccggtttcccacttg
gtagcgattgatgccgacacaggagaagtcactgctcagagggctctggactatgaacag
atgaccagcattgagttccaagtgatagcagaggaccgggggcaaccgcagcttgcatct
agtgtctccatgtgggtcagcctcctggatgtcaatgataacgccccagaagtgattcag
cctgtgctgagcaatggcaaagccagtctctcggttcttgtaaatgcctccacaggccac
cttctggtgcccattgagacccccagtggcttggatccaagaggtgctggtatgctaccc
gtggccccccgcattcccccgccattcttcctggtgaccattgtagcaagagatgcagat
tcaggagctaacggagagcttcactacagcattcggcgtggtaacaaagcgtacctcttt
gtcctcagccccgacctggggcagctgttcattaatgtcactaatgccagcagcctcatt
ggtagtgagtgggagctggagatagaggtagaggaccggggcagcccccccttgcagacc
caagttctgttgaaggtcatgtttgtcaccagtgtggatcacctgagagacttggcccct
gatcaaggggccctgagcaccgtggtgctgacggtgatttgcctggcggtactgctggcc
atcttcgggttgatcttggctctggtcatgtccatccgtcggacagagaagaaggacagc
caagcctacaactgtcgggaggctgagtccacctaccgccaccagcccaagaggccccag
aaacacattcagaagactgacatccacctggtacctgtgctcaggggccaggtggaagag
ccttgtgaagttggacagccccacaaagacccaagtcaggaagcaaatgcgggcgaaggc
tgggacccctgcctacaggccccatttcacctgactccaaccctgtataggaccctgcgt
aaccggggcaacctgggagccctggatgagagccaggaggtgctgcaggacacagtccac
ctccttttcaaccacccccgacagaggaacgcctctcgggagaacctgaatcttctggaa
ccccaccccgcggtggggcagccacgttcaaggcccctgaaggttgcaggcagccccgtg
ggtacgctacccagagaccagggcatcggagaagccccacagagccccacagcctcctcg
gcaaccctgcggcggaaacgaggtctccacgccaaagtggcccctgagaaggagtctggc
ccccgtcagatcctgcggagcctggtccgtctgtccgtggctgccttcgccgagcggaac
cctatggaggagctcaccgtggattcaccgcctgtccagcaaatttcccagctgctgtcc
ttgctgcatcagggccaattccagcccaaaccaaaccaccggggaaataagtattcatcc
aagcccgctggtggcggcaggagtgcagtgccagatacagatggtcccggtgccagcatg
ggtggccaggcaagactggaccaggaggacgggctcttggactctgaagaagacctctct
gtgaagcagctactagaagaagagctgtccagcctgctggacccacacacaggcctggac
ctgaaccggctgagcgccccggacccagcctggatggcgaggctctccttgcccctcgcc
accaactaccgcgacaacgtgtgctctgcggacgcctcggcctcctcggaggcgcctcgg
accttccagacgttcgggaaggcggcggggcccgagctgagccccgcgggcacgcggctg
gccagcaccttcgtttcggagatgagctcgctgttggagatgctgctggcgcagcgctcc
agcgtggtgccggtggaagccgcctcggaggcgctgcggcggctctcggtctgcgggcgg
accctcagcctggacctggccaccagcggggcctcgggcacggaagcccaggggccggcc
gctgggaagaaaggtagggccagcagcagcagcagcagcagcagcaggggcctctga
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