Echinops telfairi (small Madagascar hedgehog): 101664259
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Entry
101664259 CDS
T08707
Symbol
DHX36
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101664259 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etf03019
]
101664259 (DHX36)
03012 Translation factors [BR:
etf03012
]
101664259 (DHX36)
Enzymes [BR:
etf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101664259 (DHX36)
Messenger RNA biogenesis [BR:
etf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
101664259 (DHX36)
Translation factors [BR:
etf03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
101664259 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
ATPase
PhoH
AAA_23
NPHP3_N
NACHT
AAA_14
DUF6782
AAA_34
Motif
Other DBs
NCBI-GeneID:
101664259
NCBI-ProteinID:
XP_004709081
LinkDB
All DBs
Position
Unknown
AA seq
922 aa
AA seq
DB search
MDEHREEQIVQLLNSVQAKSDKDSEAQISWFAPEDHGYGTEIPTENKPSSEKKLEDQKKK
LIDQEKVTFKSKDRSYIDRDSEYLLQENEPNVTLDQQLLEDLQRKKTDPRYIEMQHFREK
LPSYGMQKELVDLIANNQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRR
ISAISVAERVAAERAESCGGGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDPQLT
SVSHIVLDEIHERNLQSDVLMTVIRDLLTSRPDLKVILMSATLNAEKFSEYFGNCPMIHI
PGFTFPVVEYLLEDIIEKIRYVPLQKEHRSQFKKGFMQGHVNRQEKEKKEAIYKERWPDY
VRELRRRYSAGTIDVLEMVDDEKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISSLHD
LLMSQVMFKSDKFLIIPLHSLMPTINQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYV
IDGGKIKETHFDTQNNISTMSTEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDY
QLPEILRTPLEELCLQIKILRLGGIAYFLRRLMDPPSNEAILLSIKHLMELNALDKQEEL
TPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADAKRK
ELAKDSKSDHLTVVNAFEGWEEARRRGFRYEKDYCWDYFLSSNTLQMLHNMKGQFAEHLL
GAGFVSSRSPKDPKSNINSDNEKIIKAVICAGLYPKVAKIRPNLEKKRKLVKVYTKTDGL
VAIHPKSVNVQQTEFHYKWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDNDQE
TIAVDEWIIFQSPARIAHLVKELRKELDVLLQEKIENPHPVDWKDTKSRDCAVLSAIIDL
IKTQEKAXPKNFPPRIQTGYYS
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggatgagcaccgagaagagcaaattgtgcagttactgaattctgtccaagctaagagt
gataaagattcagaagcacaaatatcctggtttgctcctgaggatcatggatatggtact
gaaattcctaccgagaacaaaccaagctcagagaagaaacttgaggaccagaaaaagaaa
ttgatagaccaagaaaaagtaacatttaaaagcaaggacagatcatatattgatcgtgat
tctgaatatctcttgcaagaaaatgaaccaaatgtaaccttagatcaacaactgttagaa
gatttacagcggaaaaaaactgaccctcgatatatcgaaatgcagcatttccgggaaaag
ttgccatcatatggaatgcaaaaggaattggtagatttgattgctaacaatcaggtaacg
gtaataagtggtgaaactggttgtggaaaaaccacgcaggttactcagttcattttggat
aactacattgaacgaggaaaaggatctgcctgcaggatagtttgtactcagccgagaaga
atcagtgccatttctgttgctgagcgagtggctgcagaaagggctgagtcttgtggcggt
ggtaacagtactggctaccagattcgtctccagagtcggttgccacggaaacagggctca
atcttatactgtaccaccggaatcatccttcagtggctccagtcagacccgcaattaacc
agtgtgagtcatattgtccttgatgaaatccatgaacgaaatctacagtcagacgtttta
atgactgttattagagatcttctcacttctcgacctgacctgaaagtaatattgatgagt
gccacattgaatgcggagaaattttcagaatattttggtaactgtccgatgatacacata
cctggtttcacttttccagttgtggagtatcttttagaagatataattgaaaaaataaga
tatgtcccattacaaaaagaacacagatcccagtttaagaagggtttcatgcaggggcat
gtaaacagacaagaaaaagaaaaaaaagaagccatctacaaagaacgttggccagattat
gtaagggaacttcggagaaggtattctgcaggtactatagatgttttagaaatggtggac
gatgaaaaagttgatctgaatttgattgctgcccttatccgacacattgttttagaagaa
gaggatggtgcaatattagtgtttctacccggctgggacaatatcagtagcttacatgat
ctcttgatgtcacaagtgatgtttaaatcagataagtttctcattatacctttacattca
ctgatgccaacaattaatcagacacaggtatttaaaaaaactcctcctggtgttcggaaa
atagtcattgctaccaacattgcagagacgagcattaccatagatgatgtagtttatgtg
atagatggaggaaaaataaaagagacacactttgacactcagaacaacatcagtacgatg
tccactgaatgggtcagtaaagcaaatgccaaacaaaggaaaggccgagctggcagagtt
caacctggccattgttaccatctctacaacggtcttagagcaagccttctagatgactat
caattgccagaaattttgagaactcctttggaggaactttgcttacaaataaagatttta
aggcttggtggaattgcatattttttgaggagattaatggatccaccatcaaatgaggca
atattactgtccataaaacacctgatggaactgaatgctttggataaacaggaagaattg
acccctcttggagtccacttagcacgtctaccagtcgagccacatattggaaaaatgatt
ctctttggagctctgttctgttgcttagacccagtactcactattgctgctagtctcagc
ttcaaagatccctttgtcattccattgggaaaagagaagattgcagatgcaaaaagaaaa
gaattggcaaaggattctaaaagtgaccacctcacagttgtgaatgcatttgagggctgg
gaggaagctaggcgacgcggtttcagatatgaaaaggactattgctgggattattttctg
tcttcaaacaccctccagatgttgcataatatgaaaggacagtttgctgagcatcttctt
ggagctggatttgtaagcagtagaagtcctaaagacccaaaatctaatataaattcagat
aatgagaagataattaaggctgttatctgcgctggtttataccccaaagttgctaaaatc
cggccaaatttggaaaaaaaacgaaaactggttaaagtgtacacaaaaactgatgggtta
gtggccattcatcctaaatctgttaatgtgcaacaaacagaatttcattataagtggctt
atctatcacctgaagatgagaacaagtagtatatacttgtatgactgcacagaggtatct
ccctactgtctcttgttctttggcggtgatatttccatccagaaggataacgatcaagaa
acaattgctgtagatgagtggattatctttcagtctccagcacgaattgcccatcttgtg
aaggaattaagaaaggaactagatgtccttctgcaagagaagattgaaaaccctcatcct
gtagactggaaggatactaaatccagagactgtgcggtgctgtctgctattatagacttg
atcaaaacacaggaaaaggctnctcccaagaactttccgccgcggatccagactgggtat
tacagctga
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