Echinops telfairi (small Madagascar hedgehog): 101664492
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Entry
101664492 CDS
T08707
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X3
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf04120
Ubiquitin mediated proteolysis
etf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101664492 (SYVN1)
04120 Ubiquitin mediated proteolysis
101664492 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
etf04121
]
101664492 (SYVN1)
Enzymes [BR:
etf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101664492 (SYVN1)
Ubiquitin system [BR:
etf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101664492 (SYVN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
zf-RING_5
zf_RING_Vps8_fungal
zf-ANAPC11
zf-RING-like
FAR1_N
zf-HC5HC2H
zf-Nse
Endonuclease_7
zf-C3H2C3
zf-RING_Vps41
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
101664492
NCBI-ProteinID:
XP_004713583
UniProt:
A0ABM0J2V4
LinkDB
All DBs
Position
Unknown
AA seq
629 aa
AA seq
DB search
MLPGLRARAMFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAF
VLVFLLGKVMGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLL
FLKCFHWLAEDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSILTRGASVQ
LVFGFEYAVLLTMVLTVFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFM
TIMIKVHTFPLFAIRPMYLAMRQFKKGVTDAIMSRRAIRNMNTLYPDATPEELEAMDNVC
IICREEMVTGAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQSPPPPEPADQ
GPPPAPHPPPLLPQPPNFPQGLLPPFPPGMFPLWPPMGPFPPVPPPPSSGEAGAPPSTSA
AALSRPNGAAAAAATSTVAGASAQAPGPAPASEAGPAPAFPFPPPWMGMPLPPPFAFPPM
PVPPAGFAGLTPEELRALEGHERQHLEARLQSLRNIHTLLDAAMLQINQYLTVLAALGPP
RPATSVNPSEEAAASPVATAAAATATTSTSVPSPEATSPSLGASPSSPEPEKSSAPESVG
AEELPEDGEPDAAELRRRRLQKLESPVAH
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgctcccaggtctccgggccagggccatgttccggaccgccgtgatgatggccgccagc
ctagcgctgactggggccgtggtggctcatgcctactacctcaagcaccagttctacccc
actgtagtctacctgaccaagtccagccccagcatggcggtcctgtacatccaggccttc
gtccttgtcttcctcttgggcaaggtgatgggcaaggtgttctttgggcagctgagggca
gcggagatggagcacctcctggaacgatcctggtacgccgtcaccgagacctgcctggcc
ttcacggtcttccgggacgacttcagcccccgctttgtcgccctcttcaccctgctgctc
ttcctcaagtgtttccactggctggctgaggaccgcgtggactttatggaacgcagcccc
aacatctcctggctctttcactgccgaattgtctccctcatgttccttctgggtatcctg
gacttcctcttcgtcagccatgcctatcacagcatcctgacccgtggggcctcagtgcag
ctggtgtttggctttgagtacgccgtcttgctcaccatggtgctcaccgtcttcatcaag
tacgtgctgcactccgtggacctgcagagcgagaatccctgggacaacaaggcagtgtac
atgctctacaccgagctgttcacaggcttcatcaaggttctgctgtacatggccttcatg
accatcatgatcaaggtgcacaccttccccctcttcgccatccgacctatgtacctggcc
atgaggcagttcaagaaaggggtgacagacgccatcatgtctcgccgagctatccgtaac
atgaacacactgtatccagacgccacccccgaggagctcgaggccatggacaacgtctgc
atcatctgccgggaggagatggtaaccggcgctaagcggctgccctgtaaccacattttc
cacaccagctgcctgcgctcctggttccagcggcaacagacctgccctacctgccgcatg
gatgtccttcgggcatcgctgccggcccagtcaccacctccccccgagcctgcagaccag
ggtccaccgcctgcgcctcaccctccaccactcctgccccagccccctaacttcccccag
ggtcttctgccaccgttccctccaggcatgttcccactgtggccccccatgggccccttc
ccacctgtcccaccacctcccagctcgggagaggcgggggcgcctccctccacaagtgca
gcagccctctcccggcccaacggagcagccgccgcagccgccacctccacagttgctggg
gcctctgcccaggcacctggccctgcccctgcctccgaggctgggccagcccccgctttc
cccttccctcccccctggatgggcatgcccctgcctccacccttcgccttccccccaatg
ccagtgccccccgcgggctttgccgggctgacccccgaggagctgcgggccctggaaggt
catgagcggcagcacctggaggcccggctgcagagcctgcgcaacatccacacgctgctc
gacgctgccatgctgcagatcaaccagtacctcaccgtgcttgccgccctggggcccccc
cggcctgccacttcagtcaacccctctgaggaggctgcggcctctccagtggctactgct
gctgctgccaccgctaccacctccacaagcgtccccagcccggaggccaccagcccatcc
ctgggagcctctccttcatccccagagcctgagaagtcttcagctcccgaatcggtgggc
gccgaggaactgcccgaggacggggagcccgatgcagcagagctccgccgccgccgccta
caaaagctggagtccccggttgcccactga
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