Echinops telfairi (small Madagascar hedgehog): 101664580
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Entry
101664580 CDS
T08707
Symbol
LRRC4B
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf04514
Cell adhesion molecule (CAM) interaction
etf04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
101664580 (LRRC4B)
04517 IgSF CAM signaling
101664580 (LRRC4B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
etf04515
]
101664580 (LRRC4B)
Cell adhesion molecules [BR:
etf04515
]
Immunoglobulin superfamily
NGL family
101664580 (LRRC4B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
ig
LRR_9
V-set
Ig_2
LRR_EndoS
VEGFR1-3_N_Ig-like
DUF7617
DUF5447
Zwei_Ig_N
Motif
Other DBs
NCBI-GeneID:
101664580
NCBI-ProteinID:
XP_004710747
UniProt:
A0ABM0IYE1
LinkDB
All DBs
Position
Unknown
AA seq
534 aa
AA seq
DB search
MSPSSPQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQ
AFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYL
NLGMCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNA
FDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNPWHCNCDVLWLSWWLKETVPS
NTTCCARCHAPAGLKGRYIGELDQSHFTCYAPVIVEPPTDLNVTEGMAAELKCRTGTSMT
SVNWLTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTGQYTCMVTNSAGNTTASATTA
PAPRSSRPTEKAFTVPITDVTENALKDLDDVMKTTKIIIGCFVAITFMAAVMLVAFYKLR
KQHQLHKHHGPTRTVEIINVEDELPAASAVSVAASAVTVGGGGGVGGDSHLALPALERDH
LNHHHYVAAAFKAHYGGNPGGGGCGGKGPPGLNSIHEPLLFKSGSKENVQETQI
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgtccccttcctcccctcaggtgatccggacagacacgttcaaacatctgagacacctg
gagatcctgcagttgagcaagaacctggtgcggaagatcgaggtgggcgccttcaacggg
ctgcccagcctcaacacgctggaactgttcgacaaccggctgaccacggtgcccacgcag
gccttcgagtacctgtccaagctccgcgagctctggctgcggaacaaccccatcgagagc
atcccctcgtacgccttcaaccgcgtgccctcgctgcggcgcctggacctgggcgaactg
aagcggctggagtacatctcggaggcggccttcgaaggcctggtcaacctgcgctacctc
aacctgggcatgtgtaatctcaaggacatccccaacctgacggccctggtgcgcctggag
gagctggagctgtcgggcaaccggctggacctgatccgcccgggctcgttccagggcctc
accagcctgcgcaagctgtggctgatgcacgcccaggtggccaccatcgagcgcaacgcc
ttcgacgacctcaagtcgctggaggagctcaacctgtcgcacaacaacctgatgtcgctg
ccccacgacctcttcacgcccctgcaccgcctcgagcgcgtccacctcaaccacaacccc
tggcactgtaactgcgacgtgctctggctgagctggtggctcaaggagacggtgcccagc
aacaccacgtgctgtgcgcgctgccacgcgcccgccggcctcaaggggcgctacatcggc
gagctggaccagtcgcacttcacgtgctacgcgcccgtgatcgtggagccgcccaccgac
ctgaacgtgaccgagggcatggcggccgagctcaagtgccgcacgggcacctccatgacc
tccgtcaactggctgacgcccaacggcacgctcatgacgcacggctcgtaccgggtgcgc
atctccgtgctgcacgatggcacgctcaacttcaccaacgtcaccgtgcaggacacgggc
cagtacacgtgcatggtgacgaactcggcgggcaacaccacggcctcggccaccacggcg
cccgcgccgcgctcctcgcggcccacggagaaggcgttcaccgtgcccatcacggacgtg
acggagaacgccctcaaggacctggacgacgtcatgaagaccaccaagatcatcatcggc
tgcttcgtcgccatcaccttcatggcggccgtgatgctggtggccttttacaagctgcgc
aaacagcaccagctgcacaagcaccacgggcccacgcgcaccgtggagatcatcaacgtg
gaggacgagctgcccgccgcctcggccgtgtccgtggccgcctcggccgtgaccgtgggc
ggcggcggcggcgtgggtggggacagccacctggccctgcccgccctggagcgcgaccac
ctcaaccaccaccattacgtggcggccgccttcaaggcccactacggcggcaaccccggg
ggcgggggctgcgggggcaagggcccgccgggcctcaactccatccatgaacctcttttg
ttcaagagcggctccaaggagaacgtgcaggagacgcagatctga
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