Echinops telfairi (small Madagascar hedgehog): 115873518
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Entry
115873518 CDS
T08707
Symbol
RABGEF1
Name
(RefSeq) rab5 GDP/GTP exchange factor
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
115873518 (RABGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
etf04131
]
115873518 (RABGEF1)
Membrane trafficking [BR:
etf04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
115873518 (RABGEF1)
Protein recycling
Other Rab GTPase associated proteins
115873518 (RABGEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5601
zf-A20
DUF6185
MCM_N
Motif
Other DBs
NCBI-GeneID:
115873518
NCBI-ProteinID:
XP_045140452
LinkDB
All DBs
Position
Unknown
AA seq
469 aa
AA seq
DB search
MLRKPFRKKMSLKSERRGIHVDQSELLCKKGCGYYGNSAWQGFCSKCWREEYQKARQKQI
QEDWELAERLQREEEEAYASSQSSQGAQSLTFSKFEEKKTNEKTRKVTTVKKFFSASSRV
GSKKELQEAKAPSPSINRQTSIETDRVSKEFIDFLKTYHKTGQEIYKQTKMFLEGMHYKR
EFSIEEQSEHTQDFYQGMAERIQTRGKVPPERVEKIMDQIEKYIMTRLYKHVFCPETTDD
EKKDLAIQKRIRALHWVTPQMLCVPVNEEIPEVSDMVVKAITAWGPTATWWSSSADRRPA
ATPCTPPLNGVQPRVGKEGYLSPTPYPCTELQPFPLQCCAVAFIEKLDAQSLNLSQEDFD
RYMSGQTSPRKQEAEPWAPDACVGVKQMYKNLDLLSQLNERQERILSEAKKLEKDLIDWT
DGVAKEVRDIVEKYPLEIKPPSQPLAAIDSENVENDKLPPPLQPQVYAG
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgaaagcctttcaggaagaagatgagcctgaagtctgaacgccgaggaattcat
gtggaccagtcggagctcctgtgcaagaaaggatgcggttactacggcaactctgcttgg
cagggcttctgctccaagtgctggagggaggagtaccagaaagccaggcagaagcagatt
caagaggactgggaactggccgagcggctccagcgggaggaggaagaggcctatgccagc
agtcagagcagccagggggcccagtccctcacattctccaagtttgaggagaagaaaacc
aacgagaagacccgcaaggtcaccacggtgaagaagttcttcagcgcctcttccagagtg
ggctccaagaaagaactccaggaagcaaaagctcccagcccatccattaaccggcagacc
agcattgaaacggatagagtttctaaagaattcatagactttctcaagacctaccacaag
acaggccaagaaatctataagcagaccaagatgtttctggaagggatgcattacaaaagg
gaattcagcatcgaggagcagtctgagcacactcaggacttctaccaaggcatggcggaa
agaatacagacccgcgggaaagtgcccccggaaagagttgagaagatcatggaccagatt
gagaagtacatcatgacccgtctctataagcacgttttctgcccggaaaccactgatgat
gagaagaaagacctcgccattcagaagcggataagagccctgcactgggtcacaccacaa
atgctctgtgtccccgtcaacgaggagatcccggaagtgtctgacatggtggtgaaagca
atcacagcctggggtcccacagccacgtggtggagcagcagtgccgacagaaggccagca
gccactccctgcactcctcctttaaacggtgtccaaccccgggtgggaaaggaggggtac
ctttcccccaccccatacccctgcactgagctccagccttttcccctgcagtgctgtgcc
gtggccttcattgagaaattggatgcccagtccctgaacctgagtcaggaggattttgac
cgctatatgtcgggccagacgtcacctcggaaacaggaggctgagccttgggccccagat
gcttgtgtgggcgtgaagcagatgtacaagaacttggacctcctgtctcagctgaacgag
cggcaggagcgcatcctgagtgaagccaagaaactggaaaaggacctcatcgactggacg
gacggcgtggccaaagaggtccgggacatcgtggagaagtacccgctggagattaagccc
cccagccagcccctggcagccattgactcagagaacgtggagaacgacaagctcccgccg
cccttgcagcctcaggtgtacgcaggatga
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