Echinops telfairi (small Madagascar hedgehog): 123520875
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Entry
123520875 CDS
T08707
Name
(RefSeq) ATP-dependent RNA helicase DDX19B-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03013
Nucleocytoplasmic transport
etf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123520875
03015 mRNA surveillance pathway
123520875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etf03019
]
123520875
Enzymes [BR:
etf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123520875
Messenger RNA biogenesis [BR:
etf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
123520875
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
ResIII
Motif
Other DBs
NCBI-GeneID:
123520875
NCBI-ProteinID:
XP_045149861
LinkDB
All DBs
Position
Unknown
AA seq
428 aa
AA seq
DB search
MATDSWALAVDQQEAAAESLSNLHLKEEKIKPDVNGAVVKTSAHAEKPDEEEKEDRAAQS
LLNKLIRSNLVDNTNQVEVLQRDPNSPLYSVRSFEELRLKPQLLQGVYAMGFNRPSKIQE
NALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPANRYPQCLCLSPTYELALQTGK
VIEQMGRFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCAKLKFIDPKKIKVFV
LDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKRE
EETLDTIKQYYVLCNNRDEKFQALCNLYGAITIAQAMIFCHVSSSKCNICSVSLPETHFS
MEGGLAPSLWQEREAGLLSRTSTGPVLITGLQNFILIRPCPENNMPFFPRYLDSEPAFYL
VMGLIDPG
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggccacagactcgtgggccctggcagtggaccagcaggaagcagccgcagagtcgttg
agcaacttgcatcttaaggaagagaaaatcaaaccagatgtcaatggtgctgttgtcaag
accagtgctcatgcagagaagccggatgaagaagaaaaagaggacagggccgcccagtcc
ttactcaacaagctgatcagaagtaacctggttgataacacaaaccaggtggaagtcttg
cagcgggacccgaactcgcccctctactccgtgcggtcttttgaagagctccgactgaaa
ccacagcttctccaaggtgtctatgccatgggcttcaaccgcccatccaagatacaagag
aatgccttgcctttgatgctcgctgaacccccccagaacttgattgcccagtctcagtcg
ggcactgggaaaacagctgcctttgtattggccatgctcagccaagtagagcctgcaaac
agatacccccagtgtttgtgcctctccccaacgtatgagctggccctgcagacgggaaag
gtgattgagcagatgggcagattttaccccgaactgaagctagcttatgctgttcgaggc
aacaaattggaaagaggtcaaaagatcagtgaacagattgtcatcggcacccctggaacc
gtgctggactggtgcgccaagctcaagttcattgaccccaagaagatcaaggtgttcgtt
ctggatgaggctgatgtaatgatagccacccagggccaccaagatcagagcatccgcatc
cagaggatgctgcccaggaactgccagatgctgcttttctcggccacctttgaagactcc
gtgtggaagtttgcccagaaagtggtccccgaccccaacatcatcaaactgaagcgtgag
gaggagaccttggacaccatcaagcagtattacgtcctgtgcaacaacagagacgagaag
ttccaagccttgtgtaacctctacggggccatcaccatcgcccaggccatgatcttctgc
cacgtgagtagcagcaagtgcaacatctgttctgtttccttaccagaaacccactttagc
atggagggtggactagctccctccctgtggcaagaaagggaagcggggctactcagccgc
accagcacaggacctgttctcattacagggcttcagaacttcattctgattagaccctgt
cctgagaataatatgcctttctttcccagatatcttgactcagaacctgcattttacctc
gtgatgggtcttatcgatcctgggtga
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