Enterococcus thailandicus: CK496_00460
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Entry
CK496_00460 CDS
T05312
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
eth
Enterococcus thailandicus
Pathway
eth03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
eth00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CK496_00460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eth03021
]
CK496_00460
03400 DNA repair and recombination proteins [BR:
eth03400
]
CK496_00460
Enzymes [BR:
eth01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CK496_00460
Transcription machinery [BR:
eth03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CK496_00460
DNA repair and recombination proteins [BR:
eth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CK496_00460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
TUTase
Motif
Other DBs
NCBI-ProteinID:
ASZ06472
LinkDB
All DBs
Position
79097..80035
Genome browser
AA seq
312 aa
AA seq
DB search
MIEFEKPRIAKIDEEKDYGKFIVEPLERGYGTTLGNSLRRILLSSLPGAAITNIQIDGVL
HEFSTIKGVREDVTQIILNIKGLALKMYGQEEKTLEIDITGPATVTAGDIIVDSDVEILN
KDMYICSVSEGATFHARLTVKPGRGYVQADENKKEDMPIGVLPVDSIYTPVRRVNYQVEN
TRVGHREDFDKLTMEIWTDGSIEPLEAMSLSAKIMTEHLDIFVNLTDEAKNAEIMVEKEE
TQKEKMLEMTIEELDLSVRSYNCLKRAGINTVQELTNKSEPEMIKVRNLGRKSLEEVKAK
LHDLGLGLRKED
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgattgagttcgaaaaaccaagaatcgcaaaaattgatgaagaaaaagattatggcaag
ttcatcgttgaacctcttgaaagagggtatgggactactttagggaattccctacgtcgt
attttattatcttctttgccaggtgctgccatcactaatattcaaatcgatggtgtactg
catgaattctctactattaaaggtgttagagaagacgtcactcaaatcatcttgaacatt
aaaggcttagcgcttaaaatgtatggccaagaagaaaaaacccttgaaatcgatattacc
ggacctgctacagtaactgctggcgatattatcgttgatagtgatgtagagattctgaac
aaagatatgtatatctgtagtgtctctgaaggagctacgttccatgctcgcttaactgtg
aaacctggacgtggttatgttcaagcagatgaaaataaaaaagaagatatgccaatcggt
gttcttccagtcgattcaatctacacaccagttcgtcgtgtaaactatcaagtagaaaac
acacgtgttggacaccgtgaagattttgataaattgacgatggagatttggacagatggt
tcaattgaaccattggaagcaatgagtttatctgcaaaaatcatgactgaacatctagat
atttttgtgaatttaactgatgaagcaaaaaatgctgaaatcatggtcgaaaaagaagag
acacaaaaagaaaaaatgttggaaatgacaattgaagaattagacttatctgttcgctct
tataattgtttgaaacgtgcaggaattaatactgtacaagaacttacgaataaatctgag
ccagaaatgatcaaagtccgtaatttgggccgtaaatcattggaagaagttaaggcaaaa
ttgcatgacttaggtttaggtttacgtaaagaagattaa
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