Enterococcus thailandicus: CK496_00900
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Entry
CK496_00900 CDS
T05312
Name
(GenBank) ATP-dependent helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
eth
Enterococcus thailandicus
Pathway
eth03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eth00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CK496_00900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eth03019
]
CK496_00900
03009 Ribosome biogenesis [BR:
eth03009
]
CK496_00900
Enzymes [BR:
eth01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CK496_00900
Messenger RNA biogenesis [BR:
eth03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CK496_00900
Ribosome biogenesis [BR:
eth03009
]
Prokaryotic type
rRNA helicases
CK496_00900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ASZ06556
LinkDB
All DBs
Position
169090..170610
Genome browser
AA seq
506 aa
AA seq
DB search
MHLKFKELELSPELLKSVERAGFEEATPIQSETIPLALAGKDVIGQAQTGTGKTAAFGLP
MLEKIDPQRHELQGLVISPTRELAIQTQEELYRLGRDKKIRVQAVYGGADIGRQIRGLKD
RPHIVVGTPGRMLDHINRHTLKLGTVQTLVLDEADEMLNMGFLEDIEKIISTVPEERQTL
LFSATMPPAIKNIGVKFMKNPTHVKIKAKEMTADLIDQYYVRAKEYEKFDIMTRLFDVQK
PELTIVFGRTKRRVDELARGLEARGYRAEGIHGDLSQQKRMSVLRSFKSGHLDILVATDV
AARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKGGMSVTFVTPNEMGYLHVIENLT
KKRMTALRPPTEKEAFKGQLGAAFEEVEAKLEENGLDKYLSPADKLLEKYSAQDLAALLL
KTVAKDPSDAIPVKITPERPLPSQKKGFNKNGKRGGGNNRNRRGEGGNYRGNKSKGGYNK
NNGNHKDGGRRQNDKKRGFVIRSNND
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
attcatttgaaatttaaagaattagaattatcaccagaattattgaaatcagttgaacgt
gctggttttgaagaagcaacaccgatccaatcagaaacaattcctttagcattagctggg
aaagacgttattggtcaagcacaaacaggtactggtaaaacagctgcttttgggctacca
atgttagaaaaaatcgaccctcaacgccatgaattacaaggtttagttatttcaccaaca
cgtgagttagctatccaaacacaagaagaactttatcgtttaggtcgcgataaaaaaatt
cgtgtacaagctgtttacggcggagcagatatcggtcgtcaaatccgtggcttaaaagat
cgtccacatatcgttgttgggacaccgggacgtatgttagatcacattaaccgtcacaca
ttaaaattaggaactgttcaaacattagttttagatgaagcagatgaaatgttgaacatg
ggcttcttggaagatattgaaaaaattatttcaactgttccagaagaacgccaaacatta
ttattctctgcaacaatgccaccagcaatcaaaaacattggtgtcaaattcatgaaaaat
ccaacacacgtaaaaatcaaagcaaaagaaatgacagctgatttgattgatcaatattat
gtacgtgcaaaagaatatgaaaaatttgatatcatgactcgtttattcgatgttcaaaaa
cctgaattgacgattgtatttggtcgcacaaaacgccgtgtagatgaattagctcgtgga
ttagaagcacgtggctatcgcgcagaaggaattcacggtgatttatcacaacaaaaacgt
atgagcgttttacgttcattcaagagcggtcatttagatattttagttgcaaccgatgta
gctgcccgtggattagatatctctggtgtgacacatgtttacaactacgatatccctcaa
gatccagaaagctacgttcaccgtattggacgtacaggtcgtgcaggaaaaggcggaatg
tcagttacttttgttacaccaaacgaaatgggttacttacacgtaattgaaaacttaacg
aaaaaacgtatgactgctttgcgtccaccaaccgaaaaagaagcatttaaaggccaacta
ggcgctgcttttgaagaagttgaagcaaaacttgaagaaaacggtttggacaaatacttg
tcaccagcagataaattgttggaaaaatattcagcacaagatttggctgcactattatta
aaaactgttgcaaaagatccttcagatgcaattccagtaaaaatcacaccagaacgtcca
ttaccatctcagaaaaaagggttcaataaaaatggtaaacgtggtggcggcaataatcgt
aatcgtcgaggcgaaggcggaaattaccgtggaaataaatctaaaggcggatataacaaa
aacaatggaaatcataaagacggcggtcgtcgtcaaaacgataaaaaacgtggatttgta
attcgctcaaataacgattaa
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