Enterococcus thailandicus: CK496_04240
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Entry
CK496_04240 CDS
T05312
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
eth
Enterococcus thailandicus
Pathway
eth02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
eth00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CK496_04240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eth03021
]
CK496_04240
Transcription machinery [BR:
eth03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CK496_04240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
ASZ07147
UniProt:
A0A179EP01
LinkDB
All DBs
Position
876599..877708
Genome browser
AA seq
369 aa
AA seq
DB search
MANVTDKKKYEAAVTAFIKEHKPKRQVVYDDLSNQLATPFTLSAEEMDKLIQKVEDAGIS
VVDENGDPSIHSLKSGEKKAEKAKTEDLSAPTGVKINDPVRMYLKEIGRVSLLTAEEEVA
LALKIEEGDQEAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVEKFDYRK
GFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRIQRQLLQDLGREPTPEEI
GAEMDLPTEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEATSPAEHAAYELLKEQ
LEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSR
SKQLKDFLE
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatgtaacagataagaaaaagtatgaagcagcagtgacagctttcatcaaagaa
cacaaacctaaaagacaagttgtctatgatgatctatcaaaccaacttgctacaccattt
acattgagtgctgaagaaatggacaaactaattcaaaaagttgaggatgctggaatcagt
gttgtcgatgaaaatggtgatccatcaattcacagtttaaaaagtggtgagaaaaaagct
gaaaaagcaaaaacagaagatttatctgcaccaactggtgtaaaaatcaacgatccagtt
cgtatgtatttaaaagaaatcggccgagtttcccttttaacagctgaagaagaagtagca
cttgccttgaaaatcgaagaaggcgaccaagaagcaaaacaacgtttagctgaagcaaac
ttgcgtttagttgtaagtattgcaaaacgttatgtgggtcgtggtatgcagttcttagat
ttgatccaagaaggaaatatgggcttaatgaaagccgttgaaaaatttgattaccgtaaa
ggattcaaattctcaacttatgcgacttggtggattcgtcaagcaatcacacgtgcgatt
gctgaccaagcacgtacaattcgtattccagttcatatggttgaaacaattaataaattg
attcgtatccaacgtcaactacttcaagacttaggtagagaaccaacacctgaagaaatt
ggggcagaaatggacctacctacagaaaaagtacgcgaaatcttaaaaattgcgcaagag
cctgtttcattagaaacaccaattggtgaagaagatgattcacatcttggtgatttcatt
gaagatcaagaagctacaagccctgctgaacatgcggcttatgaattattaaaagaacaa
ctggaagatgtattggatacattgactgaccgtgaagaaaacgtgttgcgtttacgcttc
ggtttagatgacggtcgaacaagaactttagaagaagttgggaaagttttcggtgtaacg
cgtgaacgtattcgtcagatcgaagcaaaagcactaagaaaattacgccatccatcacgt
tcaaaacaattaaaagatttcttggaataa
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