Enterococcus thailandicus: CK496_04315
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Entry
CK496_04315 CDS
T05312
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
eth
Enterococcus thailandicus
Pathway
eth03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eth00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CK496_04315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eth03019
]
CK496_04315
03400 DNA repair and recombination proteins [BR:
eth03400
]
CK496_04315
Enzymes [BR:
eth01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CK496_04315
Messenger RNA biogenesis [BR:
eth03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CK496_04315
DNA repair and recombination proteins [BR:
eth03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CK496_04315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Cas3-like_C_2
TniB
DUF3829
Transket_pyr
PNK3P
Motif
Other DBs
NCBI-ProteinID:
ASZ07162
UniProt:
A0A179EPK4
LinkDB
All DBs
Position
891939..893348
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AA seq
469 aa
AA seq
DB search
MNLSAELKRYFGFSTFRPGQEEIIQTLLDKDDVLAVLPTGNGKSLCYQLTGYLSEGLVIV
VSPLLSLMEDQVMQLQKMGEKRVVAFNSLLTFSERKYVMEHLSQYKFLFLSPEMLVQSEI
LTQLKRQKIGLFVVDEAHCVSQWGVDFRPEYQRLGEIRTQLAIPVTLALTATATSAVQQD
IETVLFTNKPKIVKHSVNRENIALFVRETTQKAAELEAIMKEINGATIIYCATKKEVERL
YAELRGRFSIGYYHGGLDASQRRQLQQQFSQNQLQFLIATNAFGMGIDKADIRYIIHYDL
PDSLENYVQEIGRAGRDQKPSTAILLYQTGDEVIHHFFNQLAKEQRQGFEIYLAHEQEIE
QPFDELQQKWLEIVKKTNQPDQWMEKLKIQEKEKQFRLYQMLRYIHATTCRREFILNYFG
EKLTEKPQNCCDIDEASWLLLAETKVGTSNFENNWEEILLNLFKKNVEG
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaacttatcagctgagttaaaacgttattttggcttttcaacttttcgtccaggccaa
gaagaaattattcaaacattgctggataaagacgacgtactagctgtcttgccaactgga
aatgggaaaagtttatgttaccagttaactggctatctatcggaaggtttggtcattgtg
gtttcacccttgctatcgctaatggaagatcaggttatgcagttgcaaaaaatgggagaa
aaaagagttgtagcatttaatagtttactgactttttcagaacggaaatacgttatggag
catttatctcaatacaaatttttatttttaagcccggaaatgttagtgcaatcagaaata
ttaacacaattaaaaagacaaaaaatcggtctttttgtggttgatgaagcacattgtgtt
tcacaatggggggttgattttcgcccagaatatcaacgtttgggcgaaataagaacacaa
ttagcgattccagtgactttggcacttacagctacagcaacaagcgcagttcaacaagat
attgaaactgtgttatttactaacaaacccaaaatcgttaagcattctgtgaacagagaa
aatatcgctctatttgtaagggaaacaactcaaaaggcagctgagctagaagccattatg
aaagaaatcaatggcgcaaccattatttactgtgcaactaaaaaagaagtggagcgtttg
tatgcagaattgcgtggtcgcttttcaattggctactatcacggtggtctagatgcaagc
caaagacgccagttacagcaacaattttcccaaaatcaattgcaatttttaattgcaaca
aacgcatttggtatggggatagacaaagcggatattcgttatattatccattatgattta
ccagatagtctggaaaattatgtacaagaaattggacgtgctggccgcgatcagaagcca
agtacagcaattttattgtatcaaacaggagatgaagtgattcatcatttttttaatcaa
ttagcgaaagagcagcgtcaaggttttgaaatttatttagcacatgagcaagagatcgaa
caaccctttgacgaacttcagcaaaaatggctagaaattgtcaaaaaaacaaatcagcca
gatcaatggatggaaaaattaaagattcaagaaaaagagaagcagtttcgtttatatcaa
atgttacgttatattcatgcaacgacttgtcgcagagaatttattttgaactattttggc
gaaaaattgacagaaaaaccacaaaattgttgtgacattgatgaagcatcatggctcctt
ttagcagaaacaaaagtaggaacaagtaattttgagaataactgggaagagattttacta
aatttatttaaaaaaaacgtagaggggtaa
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