Enterococcus thailandicus: CK496_06105
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Entry
CK496_06105 CDS
T05312
Name
(GenBank) ATP-dependent DNA helicase IV
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
eth
Enterococcus thailandicus
Pathway
eth03420
Nucleotide excision repair
eth03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CK496_06105
03430 Mismatch repair
CK496_06105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eth03400
]
CK496_06105
Enzymes [BR:
eth01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CK496_06105
DNA repair and recombination proteins [BR:
eth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CK496_06105
MMR (mismatch excision repair)
Other MMR factors
CK496_06105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C_2
Viral_helicase1
UvrD_C
Vac14_Fig4_bd
AAA_16
AAA_30
DEAD
AAA_11
NACHT
ResIII
DSPc
FtsK_SpoIIIE
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ASZ07499
LinkDB
All DBs
Position
1289160..1291298
Genome browser
AA seq
712 aa
AA seq
DB search
MKNVEKKEQQHLTSVYQELKAEKKRLLQLVQQKDQHGRQHIEEMTGDIRLNMDNITDNLD
TFANIEALNRQIDQYNIQLDSARKNLEKVERLLASPYFGKISVDFLEEEPDEDFYIGING
FTTEKGSDLIYDWRSPIAELFYNNELGKSHYQVNNREIEVAIENRRQLITKADQLINYFD
TKTTIQDDVLLDVLAQNTSRTMRDITATIQQEQNRIIRDQEAKNVLVNGVAGSGKTSTIM
QRIAYLLYQNQQTYSAKDILIFSPNQAFGHYIADVLPSLGEENPPTLTILQLARDFSEAE
VEDETTYFQRISRQEATRQERVLRSQAFITFILENTRSLQVTFNEVNQKKQVFFTPEQIA
ELFNSTPTNYDLRERIAGTKEKMLQQWEHHLLQQSQSAKLRNQLLELTEKQQREYFGKLL
TEQSETALAKYAEILLRKKYRRVTEQINELDWLDSTNLIVQLYQAFTGEEYLLQEILTLD
EAIIQLFIQHTLVEKLDLLDYKVILIDEIQDYTPAQLQLIRHFWPRADLTMVGDENQGIF
NSQISFAEISELIGDSVVYYQLTTSYRSSGAITKLFASLLENPEEMQITPIRPDGEAIQW
LPYDRLSVFIHLIEQLDSEKIYTILTKTLAEADGLRAELSEHVTKKVRILPIELAKGLEF
DHVILFDVSDKNYQTEQDQRLLYTAISRGTQAVWITYEGELTRFLTEQLKKN
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaatgtagagaaaaaagaacaacagcatttaacgtcagtttatcaagagttgaaa
gcagaaaaaaaacgattgctgcagttggttcaacaaaaagatcagcatgggcgacagcat
attgaagaaatgactggtgatattcgtttaaacatggacaatatcactgataatttagac
acctttgccaatattgaagccttgaatcggcaaattgaccagtacaatattcaactggat
tccgctagaaagaatttagaaaaggttgagcgattactagcttcgccgtattttggtaaa
atttccgtggattttttggaggaagaaccagatgaagatttttatattggaatcaatggt
tttaccactgaaaaaggatcggatttaatctacgactggcgttcaccgattgctgaacta
ttttataacaatgaactagggaagtctcattatcaagtgaacaaccgagaaattgaagta
gcaattgaaaatcgccgacagttaattactaaagcagaccaactaatcaattacttcgat
actaagacaaccattcaagatgatgtattgcttgacgtattagcgcaaaatacttcgcgc
acgatgcgagatattacggcgacaatccaacaagagcaaaatcgaattattcgtgatcaa
gaagcaaaaaatgtactggtcaatggggtagccggcagtggtaaaacttcaacaattatg
caacggattgcgtatctcctttatcaaaatcaacaaacgtattctgcaaaagatatcttg
attttttcacctaaccaagcatttggtcattatattgcagatgtcttgcctagtttagga
gaagaaaatccaccgaccttaactattttacaattggcaagagacttttcagaagctgaa
gtggaagatgaaacaacttattttcaacgtatcagtcgacaagaggcaaccagacaagaa
cgcgtcttacgaagtcaagcatttatcacatttattttagagaatactcgttcactacag
gtcaccttcaacgaggtgaaccagaagaaacaagtcttctttacacctgaacaaattgct
gagttgtttaactctacaccaacaaactatgacttacgtgaacgaattgcaggcactaaa
gagaaaatgcttcagcagtgggaacatcacttgttacaacaaagccaaagtgcaaagttg
agaaatcagttattagaactgacggaaaaacagcaacgagaatattttggtaaattatta
acggaacaatcagaaacagcgttagcaaaatacgccgaaatcttattgaggaaaaaatat
cggagagtaacagagcaaatcaacgagctagattggttggatagtaccaacttgattgtt
caattgtatcaagcatttacaggagaagaatatctgttacaagaaattttgaccctcgat
gaagcaataatccaattgttcattcagcatacattagttgaaaagcttgaccttttggat
tacaaagttatcttgattgatgaaattcaagattatacacctgcgcagcttcaattgatt
cgtcatttttggccacgtgctgatctgacaatggtgggagacgaaaatcaagggattttt
aacagtcagatttcttttgctgaaatcagtgagctgataggagactccgttgtttattat
caattaacgacaagttatcgttcaagtggcgcaatcacgaaactatttgcatcattattg
gaaaatcccgaagaaatgcaaattacacctattcgtccagacggagaagcaattcagtgg
ctcccttatgaccgactgtcagtgtttatccatctgattgaacaactggattctgagaaa
atttatacaatcctgacaaaaacattagcagaagcagatggtttgcgagcagaactttct
gagcatgtgacaaaaaaagtacggattctaccaattgaattagcaaaaggattagagttt
gaccatgtcatcttgtttgatgtttccgacaaaaattatcagacagagcaagatcaacga
ttgctttatacagcgatttctcgtggaacgcaagcggtgtggattacgtatgagggagaa
ttgacaagatttttaacggagcagttgaagaaaaattga
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