Enterococcus thailandicus: CK496_07560
Help
Entry
CK496_07560 CDS
T05312
Name
(GenBank) ATP-dependent helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
eth
Enterococcus thailandicus
Pathway
eth03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
eth00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CK496_07560
09124 Replication and repair
03420 Nucleotide excision repair
CK496_07560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eth03021
]
CK496_07560
03036 Chromosome and associated proteins [BR:
eth03036
]
CK496_07560
03400 DNA repair and recombination proteins [BR:
eth03400
]
CK496_07560
Enzymes [BR:
eth01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
CK496_07560
Transcription machinery [BR:
eth03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CK496_07560
Chromosome and associated proteins [BR:
eth03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
CK496_07560
DNA repair and recombination proteins [BR:
eth03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CK496_07560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
ResIII
PDDEXK_1
Helicase_C
CHD1-like_C
DUF7562
RhoGAP
DsrC
Motif
Other DBs
NCBI-ProteinID:
ASZ07772
LinkDB
All DBs
Position
complement(1615500..1617848)
Genome browser
AA seq
782 aa
AA seq
DB search
MVKQSKISVRNLVEFILKRGSIDNRKKSNHTALEGAKIHRKLQKQGGDTYEKEVFLKKTV
DLDGYQLTIEGRADGIFQKEGIYYIDEIKTSEPRFEDLEKEQVELFFHQARVYAYIYSHE
HDLTEINLQLTYFQTTEEIITRKIEHQTIEELDTFFTKLVADYQEWLIFSENWRTVRNAS
LMALKFPYEQYRKGQRELAVAAYKTIRTKQKLFVEAPTGTGKTISTLFPSLKAIGEGEGE
RLFYLTAKTITRQVAEDALVALKDVGAQAKSVTITAKDKICFLTETTCNPDQCPYANGYY
NRINEGLWDLLNHENQLTREVIEKYAKKHTLCPFELSLDASLWCDVIIGDYNYLFDPTVY
LRRFFEEEKNEENLFLIDEAHNLVGRSREMYSAEISYAKTKKIKKEIPKEYAKLRRRFTK
VEKEFKQIEQALDTKTYHHQKASADSLTNALYQVSEHIKEWLAEYPEHPVQEQLLSYYFE
VLHFLKISEFYDDHYETTVEKSLYDLVVKEFCIDPSYFLEQSLAKGRSSLLFSASFSPLS
YYQETLGGKDSLAYRLPSPFPEENQQVIVASYLETTYRKRETSLPALVETIAHFTQGKTG
NYFVFFPSYSYLDQVVTVFKEQYPEVEVLIQETKMDESERETFLLNFQENPQETLIAFCV
LGGIFSEGIDLKGTRLIGSMIVGVGLPQMNHEQELIKEYYDEKEQLGFAYAYQLPGMNKV
LQAAGRVIREMTDQGIILLADRRFASPQYSQLFPKHWQNAAKVQTLSGLDETVNKFWQRT
TK
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
gtggtgaaacaatcaaaaatctctgtgcgaaatcttgttgaatttattttgaaaagagga
agcattgataatcgcaaaaagagtaaccataccgcattagaaggtgcaaaaattcaccgg
aagttgcaaaagcaaggtggagatacttatgaaaaagaagtatttcttaagaaaacggtg
gatttagacggttaccaattaacgattgaaggcagagcagatggaatttttcaaaaagaa
ggtatttattatatcgacgaaatcaagacttctgaaccacgctttgaagatttggagaaa
gaacaagttgaattgttctttcatcaagcacgagtgtatgcttatatctatagtcatgag
cacgacttgacagaaatcaatttacaattaacttattttcaaacaacggaagaaattatt
actcggaaaatcgagcatcaaacgattgaagagttagatactttttttacaaaattagta
gcggactatcaagaatggctgattttttctgagaattggcggactgttcggaatgcgtcg
ttgatggcattgaaatttccttatgaacagtaccgaaaaggacaacgtgaacttgcagtt
gcggcttataaaacgatccggacaaaacaaaaactttttgtcgaagcgcccacaggaaca
ggaaaaacgatttcaacgttgtttccgagtctgaaagcaattggcgaaggtgaaggagaa
cgacttttttatttaacagccaaaacaatcacgcggcaagtggcggaagatgctttagtt
gccttgaaagatgttggagcacaagcaaaaagtgtaacgattactgcaaaagataaaatt
tgttttctaacagaaacaacgtgtaatccagaccagtgtccttatgccaatggttactat
aatcggatcaatgaaggtttatgggatctactgaatcacgaaaatcagctgaccagagaa
gtgattgaaaaatatgcaaaaaaacatactctgtgtccgtttgaattgtctttggatgca
agtctttggtgcgatgtgattattggtgattacaattatttgtttgatccaactgtttat
ttgcgacgattttttgaagaagaaaaaaatgaagagaacctttttctgattgatgaagcg
cataatctggtggggcgttcaagagaaatgtattcggcagaaatctcttatgcaaaaaca
aaaaaaataaaaaaagagattccaaaagaatacgcaaagttacgacgacgttttacaaaa
gtagaaaaggaattcaagcaaattgaacaagcgttagataccaaaacatatcatcatcaa
aaagcttctgcagattcattgaccaatgcgttgtatcaagtcagtgaacatatcaaagaa
tggctagctgaatatccagagcatccagtgcaagaacagttattatcctattattttgag
gtgttgcattttttgaaaatcagtgagttttatgacgatcattatgaaacaacagttgag
aagagtttgtatgatttggtagtgaaagaattttgtatcgatccaagttattttcttgag
cagtcattagcaaaaggacgaagtagcttgttgttttctgctagtttttctccgttatct
tactatcaagaaacattgggtggaaaagatagtttggcatatcgtttgccaagcccattt
ccagaagaaaatcagcaagtgattgttgcaagttatcttgaaaccacttatcgaaaacga
gaaacaagcttgccggcattagttgaaacgattgcacatttcacgcagggaaaaacagga
aactattttgttttctttccttcttatagctatctagatcaagtagtaacggtttttaaa
gaacagtatcctgaggtggaagtactaattcaagaaacaaagatggatgagagcgagcgc
gaaacatttttattgaattttcaggaaaatcctcaggaaaccttgattgcattttgtgta
ttgggtggtattttctcagaaggtattgatttaaaaggaacgcgcctgattggtagtatg
attgttggcgttgggttacctcaaatgaatcacgaacaagaattgattaaagaatactat
gacgaaaaagagcagttgggatttgcttacgcgtatcaattaccagggatgaataaagta
ttgcaagctgctggtcgagtgattcgagagatgaccgatcaaggaattatcttattagca
gatcggcgttttgctagtccacagtatagtcaactgtttcctaaacattggcaaaatgct
gcaaaggtccaaactttaagcgggcttgatgaaacggtaaacaaattttggcaacgaacg
acaaaataa
DBGET
integrated database retrieval system
