Candidatus Endomicrobiellum trichonymphae Rs-D17: RSTT_004
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Entry
RSTT_004 CDS
T05087
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
eti
Candidatus Endomicrobiellum trichonymphae Rs-D17
Brite
KEGG Orthology (KO) [BR:
eti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eti03032
]
RSTT_004 (gyrA)
03400 DNA repair and recombination proteins [BR:
eti03400
]
RSTT_004 (gyrA)
Enzymes [BR:
eti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RSTT_004 (gyrA)
DNA replication proteins [BR:
eti03032
]
Prokaryotic type
DNA Topoisomerases
RSTT_004 (gyrA)
DNA repair and recombination proteins [BR:
eti03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RSTT_004 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
BAV58584
LinkDB
All DBs
Position
12616..15138
Genome browser
AA seq
840 aa
AA seq
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MPKEKNIKDEQEILPVSIIPRNIEDEMKNSYIDYAMSVIVGRALPDVRDGLKPVHRRILY
AMKEMGLKHNTAYKKSARIVGDVLGKYHPHGDSAVYGAMVRMVQDFSLRYPMIDGQGNFG
SIDGDFAAAMRYTEVRMDAITDEMLVDLDKNTVDFIPNYDGSLKEPVILPTKLPSLLING
SAGIAVGMATNIPAHNIVEVSDALVTLIDDKEISVSEIVKYIKGPDFPTGAIILGKSGIK
DYMEKGRGSVKIRAKTEIEEVKSGREAIIVNEIPYQVNKANLITSIADLVKDKKIDGIAD
LRDESDRDGIRIVIEIKRDANVQVVLNQLYKHTQMQLSFGVIMLALVNNRPKVMNVKEIL
IHHIEHRKVIIIRRTKFDLQKAEARFHILEGLKIAIDNIDAVIKIIKESADEDNARVSLM
SKLRLTKIQTEAILEMKIRQLTGLKRKEIDDEYLELIRLIEKLRSVLADPKKVLDIIKNE
ALDIKRKYGDKRRTQIQAAEADFNIEDLIQEEEVAVTMSHAGYIKRIPLDTYKAQHRGGR
GIAAMNTREEDFVENLFITSSHSYMLFFTTRGRLYWMRIYEIPEGARTSKGKAIVNLLQL
QGTEEKITAAIPIRSFNPEYTKDEYLLMCTRNGIIKKIALDKFINPRKRGIIAIKLEDGD
ILTEVKAINKNPEVVIATKKGSSIRFKESDIRVIGRAGRGVKGIELKKGDEVIGMEVFSP
DDVFLSISENGYGKRTKVGKYRLQKRAGHGVINMQMSERNGNMIGIKKANDGEEVMIITQ
NGITIRLRVNSISVIGRNTQGVRLVRLDAGDKVAAIACVVKDENSEEPQCTVKKVEKEGW
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaagaaaagaacataaaagatgaacaggaaatattgccggtaagcattattccg
cgaaatattgaagatgaaatgaaaaactcttatatagattacgctatgagcgtaattgtc
ggaagagcgttgcctgacgtgcgcgacggcttaaagccggttcacagaagaatactttat
gcgatgaaagaaatgggattaaaacataatactgcatataaaaagtcagcgagaatcgtc
ggagatgtgctaggtaaataccatcctcacggtgattctgcagtttacggcgccatggtc
agaatggtacaggatttctctttaaggtatccgatgattgacggtcagggaaacttcgga
agtatagacggcgattttgccgctgctatgcgttataccgaagtgagaatggatgcgatt
accgatgaaatgcttgtagatttagataaaaatactgttgattttattcctaattatgac
ggttctttaaaagaacctgtgatacttcccacaaagcttcccagtcttttgattaacggt
tctgcaggtattgccgtaggtatggctacaaatattcctgcccataatatagtagaagtc
agcgatgcattggtgactttgattgacgataaagagatttcagtttcagaaattgtaaaa
tatattaagggtccggactttccgacaggtgcaataattttaggaaagagcggcattaaa
gactatatggaaaaaggcagaggttcagtaaaaatcagagccaaaaccgaaatagaagaa
gttaaaagcggcagagaagccattatagtaaatgaaattccttatcaggtaaataaagca
aatcttataacttctattgctgatttggtaaaagataaaaaaattgacggtattgcagat
ttacgcgatgagtctgaccgcgacggtataagaatagtcattgaaattaaaagagatgca
aatgtgcaggttgttttaaaccagttgtacaaacacactcagatgcagttgtctttcggc
gttataatgcttgcgcttgtaaacaatagacctaaagtaatgaatgttaaagaaatttta
atacatcatattgaacacagaaaagttattattataagaagaacaaaatttgacttacag
aaagccgaagcaagattccatattttagaaggactaaaaatagcgattgacaatattgat
gctgttatcaaaattataaaagaatctgccgatgaggataatgcgcgtgtaagtttgatg
tcaaaattacgcttaactaaaattcagactgaagctattttagaaatgaaaatccgtcag
ctgaccggactaaagagaaaggagatcgatgatgaatatttagagctaataagacttatc
gagaaacttcgctctgtactagcggaccctaagaaggttttggatataattaaaaacgaa
gcccttgatataaagagaaagtacggcgataaaagaagaacgcaaattcaagctgcagaa
gctgatttcaatattgaagatttaattcaagaagaggaagttgcggtgacaatgtcgcat
gccgggtatattaaacgcataccacttgacacttacaaagcacagcacagaggcggacgc
ggaatagctgcgatgaacacaagagaggaagattttgtcgagaatttatttattacaagt
tctcattcatatatgctgttctttacaacgcgtggaagattgtactggatgagaatttac
gaaattcctgagggagcgagaacgtcaaaaggaaaagctatagtaaatctcctgcagcta
cagggaacggaagagaaaattaccgcggcgattccgataagatcttttaatcctgaatat
actaaagacgaatatctgctgatgtgtacgagaaacggcataatcaagaaaattgcgctt
gacaagtttataaatccgagaaaacgcggcataatagcgattaaacttgaagacggtgat
attttaacggaagtaaaagcgataaataagaaccctgaagttgtaatagctacaaaaaaa
ggcagttctattaggtttaaagagagtgatataagagtgataggtagagccggtcggggc
gtaaaggggatagagcttaaaaaaggtgacgaagttataggtatggaagttttttcccct
gatgatgttttcctttcgatctccgaaaacggttatggcaaaagaacgaaagtaggcaag
tatcgtttgcagaaaagagcgggacatggtgttataaatatgcagatgtcagaaagaaat
ggaaatatgataggcattaaaaaagcaaatgatggcgaagaggtaatgataataacccaa
aacggcataacgataagactcagagtaaacagtatttctgttataggcaggaatacgcaa
ggcgtgcgtctggtgcggcttgatgccggggacaaagtggcggcaatcgcctgtgtggtg
aaagatgaaaacagcgaagaaccgcagtgtactgtaaagaaagttgaaaaagagggttgg
taa
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