Candidatus Endomicrobiellum trichonymphae Rs-D17: RSTT_534
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Entry
RSTT_534 CDS
T05087
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-1
KO
K03530
DNA-binding protein HU-beta
Organism
eti
Candidatus Endomicrobiellum trichonymphae Rs-D17
Brite
KEGG Orthology (KO) [BR:
eti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eti03032
]
RSTT_534 (hupB)
03036 Chromosome and associated proteins [BR:
eti03036
]
RSTT_534 (hupB)
03400 DNA repair and recombination proteins [BR:
eti03400
]
RSTT_534 (hupB)
DNA replication proteins [BR:
eti03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RSTT_534 (hupB)
Chromosome and associated proteins [BR:
eti03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
RSTT_534 (hupB)
DNA repair and recombination proteins [BR:
eti03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
RSTT_534 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
BAV59114
LinkDB
All DBs
Position
813973..814242
Genome browser
AA seq
89 aa
AA seq
DB search
MKKPDIVKQVSDISGLTQGDSNKAIKALVKVIQITLKNNGVISLSGLGSFRAKNRKARQG
RNPKTKEVILIPPGKKVSFKPTTTLRKII
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacctgatatcgttaaacaggtttctgacatttcaggattaacgcaaggcgat
tcaaacaaagcaataaaagctttggttaaagtaatccagattaccttaaaaaacaacgga
gtgatttctttatctggccttggatcttttagagcaaaaaaccgaaaagccagacagggt
agaaaccctaaaactaaagaagtgattctcattccgccggggaaaaaggtttcatttaag
cctactacaactctcagaaaaataatatag
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