Candidatus Endomicrobiellum trichonymphae Rs-D17: RSTT_603
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Entry
RSTT_603 CDS
T05087
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
eti
Candidatus Endomicrobiellum trichonymphae Rs-D17
Pathway
eti00300
Lysine biosynthesis
eti00470
D-Amino acid metabolism
eti01100
Metabolic pathways
eti01110
Biosynthesis of secondary metabolites
eti01120
Microbial metabolism in diverse environments
eti01230
Biosynthesis of amino acids
Module
eti_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
eti00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RSTT_603 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RSTT_603 (dapF)
Enzymes [BR:
eti01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
RSTT_603 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
BAV59183
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All DBs
Position
complement(929812..930636)
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AA seq
274 aa
AA seq
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MDINFSKLTAAGNDFILIDNRENIIAQEDCQALAKKLCDRKYSIGADGLILLEKSACKDF
KMKYFNSDGSYASMCGNGGRSIAKFAYDLCVANLKMVFETDAGVINAEILPEDRVRLDLY
NPRDFKKDIKVEVNGKEFDVNFINTGVPHVVIFVDDIEKIDVFGYGRAIRRHKTFAPAGT
NVNFVKVIKDNTLLVRTYERGVEDETLACGTGITASGIISVLKGFATSPVKVIARGGDKL
SVSLRNPNDKISNVVLEGPALITFKGTVKIQSEV
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggatataaatttttcaaaacttactgctgccggaaatgattttattttgatagacaac
agagaaaatataattgcccaagaagactgtcaggctcttgcaaaaaaactctgtgacaga
aaatattcaatcggtgccgatggtttaattttacttgagaaaagcgcttgcaaagatttt
aaaatgaaatattttaactctgacggatcttatgcttctatgtgcggaaatggagggaga
tctattgcaaaatttgcttatgatttgtgtgttgcaaatttaaaaatggtttttgaaact
gatgcaggagttataaacgccgaaattttaccggaagacagagtaagacttgatttatac
aatcctagggattttaaaaaagatataaaagttgaagtcaatgggaaagagtttgatgtc
aattttataaataccggtgttccgcatgtagtcatatttgttgacgatattgaaaagatt
gatgtttttgggtacgggagagccataaggcgtcataaaacttttgctcctgcaggtaca
aatgttaatttcgtaaaagttataaaagacaatactcttcttgtgcgcacttatgaaaga
ggtgttgaggatgagactttagcctgcgggaccggcataactgcttcgggaatcatttct
gttcttaaaggttttgcgacgtctccggttaaagtgattgcaagaggcggagacaaatta
tcggtttctttaagaaatccaaatgataaaataagtaatgttgtgcttgaaggacctgct
cttataacgtttaaaggaacagttaaaatacaaagcgaagtgtaa
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