Candidatus Endomicrobiellum trichonymphae Rs-D17: RSTT_638
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Entry
RSTT_638 CDS
T05087
Symbol
groL
Name
(GenBank) chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
eti
Candidatus Endomicrobiellum trichonymphae Rs-D17
Pathway
eti03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RSTT_638 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eti03019
]
RSTT_638 (groL)
03110 Chaperones and folding catalysts [BR:
eti03110
]
RSTT_638 (groL)
03029 Mitochondrial biogenesis [BR:
eti03029
]
RSTT_638 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
eti04147
]
RSTT_638 (groL)
Enzymes [BR:
eti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RSTT_638 (groL)
Messenger RNA biogenesis [BR:
eti03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RSTT_638 (groL)
Chaperones and folding catalysts [BR:
eti03110
]
Heat shock proteins
HSP60 / Chaperonin
RSTT_638 (groL)
Mitochondrial biogenesis [BR:
eti03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RSTT_638 (groL)
Exosome [BR:
eti04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RSTT_638 (groL)
Exosomal proteins of other body fluids (saliva and urine)
RSTT_638 (groL)
Exosomal proteins of breast cancer cells
RSTT_638 (groL)
Exosomal proteins of colorectal cancer cells
RSTT_638 (groL)
Exosomal proteins of bladder cancer cells
RSTT_638 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
FtsA
NNH2
DUF7342
Cas_Cas1
Motif
Other DBs
NCBI-ProteinID:
BAV59218
UniProt:
B1GYR7
LinkDB
All DBs
Position
complement(993729..995357)
Genome browser
AA seq
542 aa
AA seq
DB search
MAKQLIYSDEARKAMKSGVDKLANAVKITLGPKGRYVVLDKKFGAPTITNDGVTIAKEIE
LEDPFENMGAQLVKEVASKTNDIAGDGTTTATVLAQSLINEGLKNITAGANANHIKKGIE
KAVAAAIDEIKKIAKQVKNKGEIAQIASISASDKEIGNLIADAMEKVGKDGVITVEEGKS
SETTLDVVEGMQFDRGYSSHYFVTDTERMQAILEDPYIIITDKKISSMQEILPLLEKIIQ
TGKSFMIIAEDIEGEALATLVLNKIRGTLKVIAVKAPGFGDRRKEMLQDIAILTGGTVIT
EETGLKLDKATIDLLGQAKRIVVDKENTTIVSGLGDKKEIEARIAQIRKQIEDTKSDYDK
EKLQERLAKLVGGVAVVNVGAATEVEMKTKKFKVEDALNATRAGVEEGIVAGGGVALLKT
QTVLEKINAADSDEKTGIEIVLKALEGPIRMIIENAGLEASVVVDKVKNSKDTAFGYDAD
NNEYVDMIKAGIVDPAKVTRTALENAASIASLILTTETLVTDIPEKSPKFPGGGGMPPMP
EY
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacaattgatttatagtgacgaggctcgtaaagctatgaaaagcggtgttgac
aaacttgcaaatgcggtaaaaattactctcggtcctaaaggcagatatgtagtcttggat
aaaaaattcggtgcgccgactattacaaatgacggcgtaacaattgcaaaagaaattgaa
cttgaagatccttttgaaaatatgggtgctcagcttgtaaaagaagtagcttcaaaaact
aacgatatagcaggagacggaacgacgacagctaccgttttagcgcagtctttgataaat
gaaggacttaaaaatattactgcgggcgcaaacgcaaaccatataaagaaagggattgaa
aaagccgttgcagcagctattgacgagattaaaaaaattgcaaaacaggtgaaaaataaa
ggagagattgctcaaatcgcctcaatttctgcaagtgataaagaaatcggaaatttgatt
gccgatgcaatggaaaaagtaggaaaagacggtgttataaccgttgaagagggaaaatct
tcggaaactactcttgatgttgtggagggaatgcagtttgacagaggctacagttcgcat
tattttgtaactgacactgaaagaatgcaggctattttggaagatccttatataataatt
accgataaaaaaataagttcaatgcaggagatacttcctttacttgagaaaattatacag
accggaaaatcttttatgattattgctgaagatatagaaggggaagctcttgcaactttg
gttcttaacaagatccgcggaacgcttaaagttatagctgttaaagctccgggatttggc
gacagaagaaaagaaatgcttcaagatatagcaattctcacgggcggaacggttatcacc
gaggaaaccggactaaagcttgataaagctacgatagatcttctcgggcaggcaaaaaga
attgttgtcgataaggaaaacacaacgatagtttcgggacttggcgataagaaagaaatt
gaagcaagaatagctcaaatccgcaaacagattgaagatacaaagtcggattacgataaa
gaaaaacttcaggaaagacttgcgaaactggtcggcggtgttgcagttgtaaatgtgggt
gcggcgactgaagtggaaatgaaaacaaagaaatttaaagttgaagacgctttgaatgcg
acaagagcgggtgttgaagaaggtattgttgccggcggcggagtagctcttctaaaaaca
caaactgttttagaaaaaattaacgctgcggattctgatgaaaagacgggtattgagatt
gttcttaaagctcttgaaggtcctataagaatgataattgaaaatgccggtcttgaagct
tccgttgtggttgataaagttaaaaattcaaaggatacagcttttggttacgatgcggac
aataacgaatatgttgatatgataaaggctggtattgttgatcctgcaaaagtaacaaga
acagcgttggaaaatgccgcttcaatagcatcgcttattcttacgactgaaacattggta
acagacattcctgagaaatctccgaagtttcctggcggcggcggaatgcctccgatgcct
gaatattaa
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