Candidatus Endomicrobium trichonymphae Rs-D17: RSTT_717
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Entry
RSTT_717 CDS
T05087
Symbol
thdF
Name
(GenBank) tRNA modification GTPase
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
eti
Candidatus Endomicrobium trichonymphae Rs-D17
Brite
KEGG Orthology (KO) [BR:
eti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eti03016
]
RSTT_717 (thdF)
Transfer RNA biogenesis [BR:
eti03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
RSTT_717 (thdF)
Prokaryotic type
Methyltransferases
RSTT_717 (thdF)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
GTP_EFTU
Dynamin_N
RsgA_GTPase
Ras
MMR_HSR1_Xtn
Roc
Gtr1_RagA
Arf
AIG1
ABC_tran
AAA_24
AAA_29
Motif
Other DBs
NCBI-ProteinID:
BAV59297
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Position
1110967..1112382
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AA seq
471 aa
AA seq
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MALRRAETLTVKYAIMNYLKEDTIAALSTAAGKSAIAVIRLSGENSFQIIGKIFKTHSKP
EQQVKHGYITDGIEKKDEVLCTFFKAPHTYTGENLVEIAAHGNPVIINEILNLLYKNGAR
PAGPGEFTYRAFLNDKMNLAEAEAVCALITSKTEMSAKAALNSLSGEFSSKIKNIRDAVT
NLIASMEANLDHPDEDNMFLSRSEKLSRFDSCIKDVQNLLNSYKTGKILQYGIKVVIIGK
PNAGKSSLLNAILGKNRAIVTDIAGTTTDTVEETIDCCGIPLIITDTAGIREHSENLIEI
LGQAKTREAVCKADILIWLFDSSSEPDCNDAKIADFLKKSDLNIPIICVLNKSDLPPLFS
SSLLNRENKVKVKISAKTGAGIADLLDEIVKIAGVSESKNDYLMINTRHFILLQNTLESL
IRTKQSLSAKDADEIACFEALSAQISLNEILGINVKQDILDTIFSTFCIGK
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
gtggcgctaagacgggctgaaacccttacagttaaatatgccattatgaattacttaaaa
gaagatactattgccgccttatcaactgccgccggaaaatctgcaatagcagttattcgt
ctgtctggtgaaaactcatttcagattataggcaaaatatttaaaactcattctaaaccg
gaacaacaagttaagcacggatacattacagacggaatagaaaaaaaagacgaagtgctg
tgcactttttttaaagcgcctcatacatatactggcgaaaacttagtagaaatcgcagcg
cacggaaaccccgtaataataaacgaaattctaaatctcttatataaaaacggcgcaaga
cccgcaggacccggtgagtttacctacagggcatttttgaacgacaaaatgaatcttgcg
gaagcggaagccgtatgcgctctaataacaagcaaaacagaaatgtccgcaaaagctgct
ttaaacagcctttcgggagaattctcttcaaaaataaaaaatattagagatgccgttaca
aatcttattgcttctatggaagcaaatctagaccatcccgacgaagataatatgttttta
tcgcgcagtgaaaaactctcaaggtttgattcttgcataaaagacgtacaaaatctttta
aattcttataaaacagggaaaattttacaatatggaataaaagtcgtaattataggtaaa
cccaatgccggcaaatcgtcgctgctcaatgcaattttaggcaaaaacagagcgattgtc
acagatattgcaggaactacaacagataccgttgaagaaacaatagactgctgcggcatt
ccacttataatcacggataccgcaggcatcagggagcactctgaaaacttaatagagatc
ttagggcaggcaaaaaccagagaggctgtctgtaaagccgacatattaatatggttattt
gattcctcttcggaaccggactgcaatgatgccaaaatagcagattttttaaaaaagtcc
gatttgaacatacccattatatgcgtattaaacaaaagtgatttaccgccgctattctca
tcctcccttctaaacagagagaataaggtgaaggtgaaaatctccgctaaaacaggagcg
ggaattgctgacctgttagacgaaattgtaaaaatcgctggtgtttcagagtctaaaaat
gattatttaatgataaatacacgtcattttattctgctgcaaaacactttagaatctcta
ataagaacgaaacagtcgctatctgcaaaagatgcagatgaaattgcctgttttgaagct
ctaagcgcccaaatatcattaaacgaaattttaggaataaatgtgaaacaggacatttta
gacacgattttttccactttttgtataggcaagtaa
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