Empidonax traillii (willow flycatcher): 114054631
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Entry
114054631 CDS
T05887
Symbol
CHD2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
etl03036
]
114054631 (CHD2)
Chromosome and associated proteins [BR:
etl03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
114054631 (CHD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Chromo
Helicase_C
CHD1-like_C
ResIII
HDA2-3
DEAD
Myb_DNA-binding
CHDCT2
Motif
Other DBs
NCBI-GeneID:
114054631
NCBI-ProteinID:
XP_027733761
LinkDB
All DBs
Position
Unknown
AA seq
1829 aa
AA seq
DB search
MMRNKDKSQGEEGSVHSNASSHSASEEASGSDSASQSESEQGSESNSSSESSESQSESES
ESTGSKSQQTPPETKEKPASKKERIADVKKMWEEYPDVYGVRRSNRSRQEPSRFNIKDEA
SSESENESPKRRRQKQLKRKIKWKREVSAGEEDEDGGEQGTSGESEPEPKKIKARRPVQR
RTVAKTGVKKPHKVQRGKRKKPDSSEDDDDDEDDETPKRQTRRRAAKNVSYKEDDDFETD
SDDLIEMTGEGADEQQDNSETIEKVLDIRLGKKGAIGASTTVYATEANGNPSADFDPEKD
EGEVQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEEEIKQWLGKVSPEDVE
YFNCQQELASELNKQYQIVERVIAVKTSKSGTGHSDFPANSRKTSSNDPEYLCKWMGLPY
AECSWEDEALISKKFQHCIDSFNSRNNSKTIPTRDCKVLKQRPRFVALKKQPSYIGGENL
ELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLVVVPL
STLTSWQREFEVWAPEINVVVYIGDLMSRNMIREYEWIHSQSKRLKFNALITTYEILLKD
KTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHF
IMPEKFEFWEDFEEDHGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMS
ALQKQYYKWILTRNYKALSKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGLET
LQSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIK
GEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAH
RIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTVLDNNSGRSNSNP
FNKEELTAILKFGAEDLFKELEGEESEPQEMDIDEILRLAETRENEVSTSATDELLSQFK
VANFATMEEEETELDERSQKDWDDIIPEEQRKKVEEEERQKELEEIYMLPRIRSSTKKAQ
TNDSESDAETKRRLQRSSGSESETDDTDDEKRPKRRGRPRSVRKDTVEGFTDAEIRRFIK
AYKKFGLPLERLECIARDAELVDKSVADLKRLGELIHNSCVSAMQEYEEQLKENPGEGKG
PGKRRGPTIKISGVQVNVKSIIQHEEEFEMLHKSIPADPEERKKYRLTCRVKAAHFDVDW
GVEEDSRLLVGIYEHGYGNWELIKTDPELKLSDKILPVETDKKPQGKQLQTRVDYLLKLL
KKDLDKKENMKDGEEGKLKKRKPRVKKENKAPKVKDEHGNELSSPRHSDNQSEEGEVKED
GLDKSPVKKKQKKKENKENKEKQTSSKKEKESDKEKKKTKDKKEKPKGGEAKSGSKGKRS
QGPVHITAGSEPIPIGEDEDDDLDQETFSICKERMRPVKKALKQLDKPDKGLTVQEQLEH
TRNCLLKIGDRISECLKAYTDQDHIKLWRRNLWIFVSKFTEFDARKLHKLYKMAHKKRSQ
EEEEQKKKEDTSSMKKPFRPEPSGSSRDSVMSQSHVPHNPHSQKIHMPPSHTQQQMHGHP
RDNYGHPNKRHFSNTDRGDWQRDRKFNYGGNSNQMWGGERHHQYEQHWYKDHHYGDRRSR
GDPHRSSGNYRPNNLSRKRPYEQYNSDRDHRGHRDYYDRHHHESKRRRSDDFRPQNYHQQ
DFRRMSDHRPPMGYHGQGPSDHYRSFHTDKLGDYKQPLPPSHPAVSDPRSPPSQKSPHDS
KSPLDHRSPLDRSLEQKNNPDYNWNIRKA
NT seq
5490 nt
NT seq
+upstream
nt +downstream
nt
atgatgagaaataaggacaaaagccaaggagaggagggttcagtccacagcaatgcatcg
agtcactcggcatccgaagaagcctctggctctgactctgcaagccagtctgaaagcgag
cagggcagcgaatcaaacagcagctcggagtcctctgagagtcagtctgaatccgaaagt
gaatcaacgggttccaaatcccagcagacccctcctgaaaccaaagaaaaaccagcctct
aagaaggaaaggatagcagatgttaaaaagatgtgggaagagtatcctgatgtttatggg
gttaggaggtcaaaccgaagcagacaagaaccgtcacgatttaatataaaagatgaggca
agtagcgaatctgaaaatgagagcccaaaaagaagacgacagaagcagttgaaaagaaaa
attaaatggaaaagagaggtctctgctggggaggaggatgaagatggaggggagcaaggc
accagtggagagagtgaacctgaaccgaagaaaattaaagcaagaagacctgtccaaagg
agaacagtggccaaaactggtgttaaaaagccccacaaagtccagcgtgggaagagaaag
aaaccagactcatctgaagacgacgatgatgacgaagatgatgagacccccaagagacaa
actcgacgcagagcagccaaaaatgtcagttacaaagaagatgatgattttgagacagat
tctgatgacctgatagagatgaccggggaaggagctgatgaacagcaagacaacagtgaa
actattgagaaagtcttggacatcaggcttggaaaaaagggagccattggtgcttccacc
acggtttatgcgaccgaagccaacggcaaccccagcgcggacttcgatcctgaaaaggat
gagggggaagttcagtacctgatcaaatggaaaggctggtcatacatccacagcacctgg
gagagcgaagagtccttgcagcagcagaaagtgaagggcctgaaaaagctagaaaacttc
aagaaaaaagaggaggagatcaagcaatggctgggcaaagtatcacctgaagatgtggaa
tatttcaactgccaacaagagctggcatcagagctgaacaaacagtatcaaatagtggag
agagtaattgctgtgaagaccagcaaatctggcacgggacattcagatttcccagcaaac
agtcgcaaaacatcctcaaatgatcccgaatacctgtgtaagtggatggggctgccctat
gctgagtgcagctgggaagatgaggctctgataagcaagaaattccagcactgcatcgac
agcttcaacagtcggaacaactccaaaacgattcccacccgggactgcaaggtattgaag
cagagaccgaggtttgttgctttgaagaagcagccctcgtacattggcggtgagaacctg
gagctgagggattaccagctggagggcctcaactggctcgctcactcctggtgcaagaac
aacagcgtgatcctggctgacgaaatgggactgggcaagacgattcagacaatatcattc
ctgtcatacctgttccatcagcaccagctgtacggccctttcctggtggtggtgcccttg
tccactctcacctcgtggcagagggagtttgaagtgtgggcacctgagataaacgtggtg
gtttacatcggagacctcatgagcaggaacatgatacgtgaatacgagtggatccattct
cagtctaaaagattgaaatttaatgcacttatcacaacatatgagatcctcctcaaggat
aagactgttttgggaagtattaactgggcctttctaggcgtggatgaagcccatcggttg
aaaaatgacgactctttgctgtacaaaacattgattgatttcaagtccaaccacaggctg
ctgatcaccggcaccccacttcaaaattcactgaaggaactctggtccctgctgcatttc
atcatgccagagaagtttgagttctgggaggattttgaggaggatcatgggaaaggtaga
gagaatggctaccaaagccttcacaaagtcctggagccttttctcctacgaagagtgaag
aaggacgtggagaaatctttgccagccaaagtggagcagatcctccgggtggaaatgtct
gctctgcagaaacagtattacaagtggattttgacaagaaactacaaagctctttcgaag
ggaacaaggggaagcacatctggtttcctgaacattgtgatggaattgaaaaagtgctgc
aaccattgctaccttatcaaacctcctgaggaaaacgagagagagaatggccttgagacc
ctccagtctctgatcaggagcagtggaaagctaattctcttggacaagctgctgaccagg
ctgcgggagagaggcaacagagtgctgatcttctcccagatggtgaggatgctggacatc
ctggcagagtacctgactatcaaacactacccttttcagcgcttggacggctcgatcaag
ggggagatccgaaagcaggcgctggatcacttcaacgccgacggctccgaggacttctgt
ttcttgttgtcaacacgagctggagggcttggaattaatttggcctctgctgatactgtt
gttatctttgattcggactggaacccccaaaatgatcttcaggctcaggcccgagctcac
cggattggacaaaagaagcaggtgaatatttaccgcctggtcacaaaggggacagtggag
gaggagatcattgagagggccaagaagaaaatggtgctggatcatttagttatccagcgt
atggacaccactggccggactgttctggacaacaactctgggagatccaactcaaatcct
ttcaacaaagaggagctgacagctattctgaagtttggagctgaagatctcttcaaggag
cttgaaggggaagagtcagagcctcaggagatggacatcgatgagattctgcgtctggct
gaaacacgggagaatgaagtgtccaccagtgccaccgacgagctcctctcccagttcaag
gtcgccaactttgcaaccatggaggaggaagagacagagctggatgagcggtcccagaag
gactgggatgatatcattccagaggaacagaggaagaaggtggaggaggaagaaaggcag
aaagagttggaggaaatctacatgctgcctcgaatccggagctcaactaaaaaggctcag
acaaatgacagcgaatcagatgcagaaactaagagaaggctgcagagatcatctggatca
gagagcgagactgacgacaccgatgatgagaagagaccaaagcgcaggggacgtcctcgg
agtgttagaaaagacactgtggaaggatttactgatgctgaaatcaggaggtttatcaag
gcttacaagaagtttggattgcctcttgaaaggttggagtgtattgcccgagatgctgag
ctggtggataaatctgtggctgatctgaaacggttaggggagctcatccacaacagctgt
gtgtcagcaatgcaagaatacgaggagcagctgaaagaaaatcccggggaagggaaggga
cctggaaaaagacgaggtcctactatcaagatttctggtgtccaagtcaacgtgaaatcc
atcatccagcacgaagaggagtttgaaatgctgcataaatccattcccgcagacccagag
gaaaggaagaagtaccgcctgacgtgccgtgtcaaagctgctcattttgatgtagactgg
ggagtggaggaggattctcgcttgttagtgggaatttacgagcatggttatggaaactgg
gagctaattaaaacagatccggaattgaagttatccgataagatcctacctgttgagaca
gataagaagcctcagggaaaacagctccaaacccgagttgattatctactgaaactgctg
aaaaaagacctggacaagaaagaaaacatgaaagatggggaagagggcaagctaaagaag
aggaaaccacgagtaaagaaagagaacaaagctcccaaagtcaaagatgagcatgggaat
gaactctcctctcctcggcactcagacaaccagtcagaagaaggtgaagtcaaggaggat
ggcttggacaagagcccggtgaaaaagaaacagaagaagaaagagaacaaagagaacaag
gaaaaacagacatcctctaagaaagaaaaggaaagtgacaaagagaaaaagaaaacaaaa
gacaagaaagagaagcctaaaggtggtgaggccaaatctgggagcaaagggaagagatcg
caaggtcccgtccacattactgcagggagtgaaccgatccccattggcgaagatgaggat
gatgatctggaccaagaaacattcagcatatgcaaggaaaggatgagaccagtcaaaaaa
gcactgaagcagcttgataagcctgataagggactgacagttcaagaacagctggagcac
acacgcaactgcctcctaaaaattggtgatcgcatctctgagtgccttaaagcctacact
gaccaggatcacatcaagctatggagaaggaacctatggatatttgtgtcaaaattcaca
gaatttgatgccagaaaactacacaaactctacaagatggctcataagaaaagatcgcag
gaagaggaggagcagaaaaagaaggaggacacgtccagcatgaagaagccgttccgccca
gagccttcaggctccagccgtgattccgtgatgtcccagtctcatgtgcctcacaatcct
cattcccagaagatccatatgcccccttcccacacccagcagcagatgcacgggcaccca
cgtgacaactatggccacccaaacaagagacacttcagcaacacagaccgaggagactgg
cagagggatcgaaagttcaactacggtggcaacagcaaccagatgtggggcggggagagg
caccaccagtacgagcagcactggtacaaggaccaccactatggggaccggcggtcgcgg
ggggatccccaccggagctccgggaactacagaccaaacaacctctcccgcaagaggccg
tacgagcagtacaacagcgaccgagaccacaggggccaccgagactattatgacaggcac
caccacgagtccaaacgtcgacggtccgatgacttccggcctcagaactaccaccagcag
gatttccgacggatgtctgatcacaggccgcccatgggataccatggccaaggaccttcg
gaccactacaggtccttccacacggacaaactgggagattacaaacagcccctccctccg
tctcaccctgcagtgtcggaccctcgctcgcccccctctcagaaatccccccacgattcc
aagtcacctcttgatcacaggtcacctctggacaggtcattggaacagaaaaacaatcca
gattataactggaacattcggaaagcataa
DBGET
integrated database retrieval system
