Empidonax traillii (willow flycatcher): 114054733
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Entry
114054733 CDS
T05887
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
etl01002
]
114054733 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
etl04121
]
114054733 (USP42)
Enzymes [BR:
etl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
114054733 (USP42)
Peptidases and inhibitors [BR:
etl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
114054733 (USP42)
Ubiquitin system [BR:
etl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
114054733 (USP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
114054733
NCBI-ProteinID:
XP_027733956
LinkDB
All DBs
Position
Unknown
AA seq
1332 aa
AA seq
DB search
MTIVNKPKSSKSKKSSSRRSDKSMKPRTKKMTSRTASLGRVPPAEDPNKVSVDKGPGGHI
YCRSSQKSKPFAQRDLVVNDGIAPPQRILFPPEKICMDWQQTQSVGVGLQNLGNTCFLNS
TLQCLTYTPPLANYMLSLEHTKSCHVEGFCMMCTMESHINQVLCCSNNAIKPTSVINGLK
RIGKHFHFGSQEDAHEFLCFTVDALQKACLNGSTKLDRSSQATTLIYQIFGGYLRSRVKC
LNCKAVSDTYEPFLDVTLDIKAVTSVTRALEQFVKPEQLDGENSYKCSKCKKMVPASKRY
TIHRSSNVLTISLKRFANFTGGKINKDVKYPEYLDLRAYMSQSIGEPLIYALYAVLVHSG
FNCNAGHYLCFIKAGNGLWYRMNDASVELSDIKTVLNQQAYVLFYIRRYDLTLGERAFYL
PAPTYPRPFLGQRGASKQPGFMGPRLPPHMIKSSSRLNGNGPLKEDPSAVGVAVKRPSSA
PPTACVQNWAISRPSMTDPSKNQKITISIHNKLPARQTVPQLECPSSAGEDEDLSKPVPS
ATVTNPSAAEPTSNQPPASLPTPHVSKQELPDEIFAEPAVNGNPKLGSENTVPYGAEPSG
KPEESKGLFKRNCNVISSNGILIGKVVRTLQNSHSSCPSAEERSQHELPKIDSLNGAISL
DNEYKENGLKLDDSTCQVQPVKPSEMFFPKANGVLETMPQALSPNPQGVLDSLTYSQLNS
LSEEKSVSGPQKSSEKDDLMETVVMEALFAYEESRKVPSNFSCEVEKLFTQPDSETIFTK
EEVAESIITKADNAHLNINGQHKVRKKSLDTEDEFLGQRDSEDIRDKDKPRRSKEPELIS
KENPLYIKGSPESKEKLGQTSSVKPDTECSSKKLASLDIPDKCQDTKDISNNYVEVPPVN
DSSITKLDKVLESQFSRADEGLSSKICEEEKHLKKNKKKIHDSKRTDKEHYRRKRENSDT
EERERQSRSKAEEHSHRRRSSRSVDTNKQNRHKQDYCSESRYRSSHNDRSSPSNGRSSGK
YSRYRSRSRERTEQDRNRYYYSKGERAWNRERYYQDEPRRWEKCRYYNDYYSSHGTRDGR
ERRSSHCDKDYDKLSQAYSRSHKDYHCKSRWVHTPLPREEDLHHFSSHRANPHHCSVPQQ
HPDRYSRDRHALPPLPAHSHPEDSSRENDKLRNSKRRYSHQEESGSDIEKKYRKVDDQRI
KKYKKVKKKKKSKDKHREKDYKLYDLDCSVLHFDNDNRKHKKKKKKKKHDRKLKDLLEYL
DPRFQKKTWEKKEESRPPDDHLCEQYRSQGRKQPYKEEMPSGAGDSKKCSSVASQECGRG
VELTEESLQYSD
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttaacaagccaaaatcctcaaagtctaaaaaatcttcatccagaaggtct
gacaaatctatgaaaccccgtactaaaaaaatgacgtcacgcaccgcgagtttgggccgg
gtaccgcctgcagaagatccaaacaaagtctctgtggacaaaggccctggagggcacatt
tattgtagatcatctcaaaaatcgaagccttttgcccaaagagatctagttgttaacgat
gggattgctccgccgcaaagaattctttttccacccgagaaaatctgtatggattggcaa
caaacccagagcgtcggggttgggctgcagaacctcggcaacacgtgtttcctcaattcc
actctccagtgtctgacctacacgcctcctcttgccaactacatgctgtcccttgagcac
accaagtcatgtcatgtagaaggattctgtatgatgtgcacaatggaaagtcacatcaac
caggtcctgtgttgctctaataatgccatcaaacctacatctgttatcaatggccttaaa
agaataggaaaacatttccattttggcagtcaagaggatgcacatgaattcttatgcttc
actgttgatgctttacagaaggcttgcttgaatgggagcaccaaattggacagatcttct
caagccaccacacttatctatcaaatctttggaggatatctaagatcccgagtgaagtgc
ttgaactgcaaggcagtatcggacacgtacgagcccttcctcgacgttaccttggacata
aaggcagttacgtctgtcaccagagctctagaacaatttgtgaaaccagaacaactggat
ggtgaaaacagctataaatgtagcaagtgtaaaaagatggttccagcgtccaagagatac
acgatccatcgctcttccaacgtcctcacgatatcactgaaaagattcgcaaattttaca
ggtggaaagatcaacaaggatgtaaaataccctgaatatttggatcttcgagcgtacatg
tcccagtccattggagaacccctcatctatgctttgtatgcagttcttgtacacagtggc
ttcaactgtaacgctgggcactatctctgcttcatcaaggctggtaatggactttggtat
cgaatgaatgatgcctcagtagaactttctgatatcaaaacagttctcaatcagcaagct
tatgtacttttttatatcaggcgctacgacctgacgctgggggaacgcgcgttctacctg
cccgccccgacctacccccgccccttcctgggccagcggggagccagcaaacagcctggc
ttcatgggaccacggctgcctcctcacatgatcaagagttcgagtcgtttaaatggaaat
ggacccttgaaagaggatcccagtgcagttggtgtggctgtaaaaaggccttcgtcagcc
ccaccgacagcctgtgttcaaaactgggccatttccaggccttcaatgactgacccgtca
aaaaaccagaagatcactatcagtattcacaacaaactgcctgcacgtcagactgtgccc
cagctggagtgcccgagcagtgctggggaggatgaggacctgagcaagcctgtcccttca
gccacagttacaaacccctccgcagcagagcctacctcaaatcaacccccggcgtcgctc
cccactcctcacgtctccaaacaggaactccctgatgaaatctttgctgagccagcagtg
aatggaaaccccaagctgggttctgagaacacggtcccttacggtgcagaaccttcagga
aaacccgaggagtcaaagggcttgtttaaaaggaattgtaacgtgatatcttccaatgga
attctgattgggaaggtggtccgcacattgcagaactcccactcgtcctgcccgagtgct
gaagagagatcccagcacgagctgccaaaaatcgattccctaaatggtgctattagttta
gataacgaatataaagaaaatggactgaaacttgacgattctacttgccaagtccaaccc
gttaaaccttctgagatgttctttcctaaagcaaacggagtgctggaaacgatgcctcaa
gctttgtcacccaatcctcaaggtgtcttagactctctcacatacagccagctgaacagc
ttgtcagaggagaaaagtgtatctggacctcagaaatcttctgagaaagatgatcttatg
gaaactgtagtcatggaagcactgtttgcttatgaagaatccaggaaggttccttccaac
tttagctgtgaggttgagaaactttttactcaaccagattctgaaaccatttttaccaaa
gaagaagttgctgaaagtattataacaaaagctgataatgcacatctcaatatcaatggt
cagcacaaggtcaggaaaaaatccttggacactgaagatgaattccttgggcagcgtgac
tctgaagacatcagagacaaagacaaacccagaagatcaaaagaacctgaactcatttca
aaagaaaaccctttgtacatcaaagggtctcctgagagcaaagagaaattagggcaaact
tcctctgtgaagcctgacactgaatgtagttctaaaaaacttgcatctctagatattcca
gataaatgccaagatacaaaggacatttctaataattatgtagaggtaccgcctgttaac
gactcttccattacaaagctggataaagtattggaaagccaattttctagagcagacgag
ggactgagcagtaaaatatgcgaagaagagaaacatctgaaaaaaaataagaaaaaaata
cacgactctaaaagaactgacaaagagcactaccgacggaagagggagaactctgacacc
gaggagagggagaggcaaagcaggagcaaagcagaggaacattcccacaggaggaggagc
tctcgcagcgtggacacgaacaagcagaaccgtcacaagcaggactattgcagtgagagc
aggtacagatcttcccacaatgacaggagcagtccaagcaacggcaggagctcagggaaa
tactctcgttacagatcccgaagcagagaaaggacagaacaagacaggaataggtattac
tattccaaaggggagagagcttggaatagagaaagatactaccaagatgagccacggaga
tgggaaaagtgcagatactacaacgattattattcctcccatggaacgagggacggcaga
gagaggaggtcctctcactgtgataaagactatgacaagttgagccaagcttacagcagg
tcccacaaggattatcactgcaaaagcaggtgggttcacaccccactccctcgagaggag
gatttacatcacttcagcagccacagagcaaacccacaccactgttcagtacctcagcag
catcctgacagatactcccgggacaggcatgcgctgccacccctgccagcacactcacac
cccgaggactcctcccgggaaaacgacaaactgaggaacagcaaaagaagatactcccac
caggaagaaagtggcagtgacatagaaaagaaatacagaaaggtagatgaccaaagaatc
aaaaagtataagaaggtcaagaagaaaaagaagtccaaagataaacatcgagagaaggat
tacaaactttatgatttggattgctctgtgctccactttgacaatgacaatcgcaaacat
aagaaaaagaagaaaaagaagaagcacgataggaaactgaaagacttattggaatattta
gatcctcgtttccagaagaaaacatgggagaagaaggaagaatcccgtcctccagatgac
catttatgtgagcaatacagaagccagggcaggaaacaaccctacaaggaagagatgcct
tctggtgcaggtgacagcaagaaatgcagctccgtggcatcccaggagtgtggcagaggt
gtggagctgactgaggaaagccttcaatactcagactaa
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integrated database retrieval system
