Empidonax traillii (willow flycatcher): 114054795
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Entry
114054795 CDS
T05887
Symbol
TTC37
Name
(RefSeq) tetratricopeptide repeat protein 37 isoform X1
KO
K12600
superkiller protein 3
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114054795 (TTC37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etl03019
]
114054795 (TTC37)
Messenger RNA biogenesis [BR:
etl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
114054795 (TTC37)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_19
TPR_14
TPR_2
TPR_16
TPR_11
TPR_8
TPR_17
TPR_12
TPR_CcmH_CycH
TPR_9
TPR_7
ANAPC3
TPR_6
ARM_TT21_C
TPR_15
BTAD
TPR_30
TolB_N
TPR_5
TPR_20
Motif
Other DBs
NCBI-GeneID:
114054795
NCBI-ProteinID:
XP_027734080
LinkDB
All DBs
Position
Unknown
AA seq
1566 aa
AA seq
DB search
MSNKEVKAALKSARDAIRNKEYKEALKHCKAVLKQEKNNYNAWVFIGLAAAELEQPDQAK
GAYKKAIELEPNQLLAWQGLANLYEKPNQTDVKGDLADVYQKLLELYKSGDKQKWCDVCN
KLVELYHQEKKYLEVAETWQKLIQMRQEEGAEKAELHQLWKKMIQLLKDGAKNQDNKTEQ
LLLTAFEHAVNSADTVPGEDHQNLYKDFIQCLSKFPHESARLEKACNDMMALYPTMSYPL
EVLCLHFVNSGTLSEEALHCFSRLLEMDTSSGPGIIGFGIKCLQEKKYKEAVKSLTEGLQ
KTNQCPAAWRYLAEAQVKIHKHRNAVLSCNQALEALEIPEGPNLWWKNLVLQLKAETLIK
IADADAAEEAIKALEQIVDASSDPVISAIRGQAYLKKGLIDEASKISQELLLSHSDLAES
HALDGYIHYSQKNYEQAERSFLNAIERKAETAEYHQYLGLTYWFMSDETKRDKGKALTQF
LKAAKLDSYLGSAFFYLGNYYRDIAGDKSRARGCYKKAFELDETDEESGTAAVDLSVELG
DMDTALSILNEVTEKASPGTAKWAWLHRGLYYLRSGQPSQAVADLQAALRADPKDSNCWE
SLGEAYLNRGSYSTALKSFRRASELNPGLMYSIYRAAALEQILGKYENAIATYQQILKKT
ENYVPALKGLGECYLMLARSALDNYLDRKAVDYIEQALEYFTRAIKHRPDISCLWKLSGD
TCTSVHVISPSKVHVQVLGSLLWGKMGKNTDKQTLNKNELLILGGRCYGRALKLMPLPSI
WCDLGINYYRQAEHLTATGTDKNEISELLEKSLQCLKKAVRLDSKNHLFWNALGVVASCS
AIGNYALAQHSFIKSVQAEQINIVAWTNLGVLYLATGNIEQAHEAFKIAQSLEPSYLLCW
IGQALIAEMVGSYDTMDLFRHTTELNMHAEGAKGYAHWVCSTLQDKANRNTELYLYNIVQ
MNAIPAAQVVLSKYTERNPDDASAFTMLGYLNEYLHLKQQAAYAYERAASLLKNSEDTEK
YNTAMQNYGRSLCALDLCDKAIEVYASIPLTEFDGVVGLALAYFKKGLLEESIKVYEKAL
SVAESEKDRAHILTALAIIAYKQDKVDAAKTLLFKCSLKEPNMESLKALCTLGLVKQDAT
LATAALKELLKHEKGDDGIYERCLTASAVYALQGRNVGIQREVSKAVHSNPDNPALWSLL
SRVVPLSASQKAKGGAVAGNVAHILDVKHGKEVLLNIAVNQLAAGCHMLEDEKNNPIKNV
QRAIHICPDNPAAWAVLMAACHAENTTVCLNNTQPKRTGLEMTLVSTVSAKTGESNLPHN
YVRILEDWCLCQAITSLEETGKLSEAEALCNKALKSCPEHPTLFLLLRQVQCKQLLKSHK
ELPGNILEELRKTVMTSSTSVAAWQWLAKVYQSQRMMIGAEMCYRKSLQLASQQGSWNGK
LSSLLRLAMLALEICMANVSNDHWPSLVQEATTEALKLSPCPLAALLQALLQYNHKMGAR
ETRRMLERVVYQPGNPETIVSVARWYLLQHLYAKDDCELIDVLIENAKANGDVRALELNE
KLLAST
NT seq
4701 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaataaagaggtgaaagcagccttaaagagtgctagagatgcaatacgaaataaa
gaatataaggaagccttaaagcattgcaaggcagtcttgaagcaagaaaaaaataactac
aatgcttgggtattcattggcctggcagctgctgagttagagcaacctgatcaggccaaa
ggagcatataagaaggctattgaactagaaccaaaccagttactggcatggcagggatta
gcaaatttgtatgagaaacccaaccaaacagatgtcaaaggagacttagcagatgtttac
caaaaactcttggaactctacaaaagtggtgacaagcagaaatggtgtgatgtatgtaac
aagcttgtggaactgtatcatcaagaaaaaaagtatttagaggtggctgaaacatggcag
aaactaatacaaatgagacaggaggaaggtgcagaaaaggcagagcttcatcagctttgg
aagaagatgatccagttactgaaagacggggcaaagaaccaagataataagactgagcag
ttgcttttgactgcatttgaacatgcggtgaactctgctgacactgttcctggtgaagac
caccaaaatctttacaaggactttatccagtgcttgtcgaaatttcctcatgaatcagct
aggttggaaaaggcctgtaatgatatgatggctttgtatcctaccatgagttatccttta
gaagtactttgcttgcactttgttaattcaggtaccttgtcagaagaagctctgcactgt
ttttctaggcttttggagatggacacaagtagtggtccaggcatcattggttttggtata
aaatgcctccaagagaagaaatacaaggaggctgttaagagtcttactgaaggtttgcag
aagactaaccagtgtccagcagcatggcgttatttagcagaggcacaggtgaaaattcac
aaacacagaaatgctgtcctgtcctgcaatcaagcacttgaggctcttgaaattcctgag
ggtcctaatctttggtggaagaatcttgtccttcagttgaaagcagagactttgattaaa
atagctgatgctgatgctgcagaagaagccattaaagcacttgagcagattgtagatgca
agcagtgatcccgtgatttcagctataaggggccaggcttatctaaagaaaggtttaatt
gatgaagcttctaagatttcacaagagcttctgttgtctcactctgatctggctgagtcc
catgctctagacggttacatccattattcccaaaagaactatgaacaagcagaaagaagt
tttctgaatgctattgaaagaaaggcagaaactgcagagtatcatcagtacttggggctc
acgtactggttcatgagtgatgagacaaaaagagacaaaggaaaagcactcactcagttc
ttgaaggctgcaaaattggacagctacttgggaagtgcctttttttatttaggtaactac
tatagagacattgctggagataaaagtagagctcgtggttgctataaaaaggcttttgaa
ctggatgaaacggatgaagaatctggaacagcagctgtagacttaagtgtggaacttgga
gacatggatactgctttgtcgatcctgaatgaggtaactgaaaaagcaagccctggtaca
gcaaaatgggcttggcttcatcgtggactttattacctgagaagtggtcagccgtcacaa
gcagtggctgatttgcaggcagctctcagagctgatccaaaggattccaactgctgggag
tctctaggggaggcttacttgaacagaggtagctactcaacagctttgaaatccttcagg
agagcaagtgagctgaacccaggtctcatgtacagcatttatagagctgcagcacttgag
cagattctaggcaaatatgaaaatgctatagctacctatcaacaaattttaaagaagaca
gaaaactatgtgcctgcactgaaaggacttggagaatgctatctcatgctggcaagatca
gcccttgataactatttggataggaaggctgtggattacatagagcaggctcttgaatat
tttacaagggcaataaagcaccgtccggatatatcttgcctctggaaactttctggagat
acctgtactagcgtgcatgttatttcaccaagcaaagtgcatgttcaagtactaggatcc
cttctttggggaaaaatgggtaaaaacactgacaaacagacactgaacaaaaatgagctg
ctcatacttggaggaaggtgttatggtagagctttaaaattgatgcctttgcctagcata
tggtgtgatcttggaataaattattatcgacaagcagagcacctcacagcaacaggcact
gataagaatgagatcagtgaactgctagagaagtccttgcagtgtctcaaaaaggctgta
agacttgacagcaaaaatcatcttttttggaatgcacttggtgtagttgcttcttgtagt
gctattgggaattatgctcttgctcaacattcgttcatcaaatctgttcaagctgagcaa
attaatattgttgcctggaccaacttgggggttttgtatctggcaactggaaacattgag
caagctcatgaagctttcaagatagcccagtctctggagccttcttacttgctgtgttgg
attggacaggctcttattgcagagatggtaggcagctatgatactatggatctcttcagg
cacacaaccgaactcaatatgcatgctgagggagcaaaaggctatgcccactgggtatgt
tcaacactgcaggacaaagccaatagaaacactgaactatatctgtacaacattgttcaa
atgaatgctatcccagcagcccaggtggtattgagcaaatatacagaaagaaatccagac
gatgcatctgctttcacaatgcttggttatttgaatgagtatctacatctaaaacagcag
gcagcatatgcctatgagagggcagcttcattgctgaaaaactctgaggatactgagaaa
tataatacagcaatgcaaaactatggcaggtcactgtgtgcccttgatctgtgtgacaag
gccattgaagtttatgcatcaatacccctaactgagtttgatggcgttgtggggctagca
ttagcttacttcaagaaaggactcttagaagaaagtatcaaagtctatgaaaaagccctg
tctgttgctgagtctgaaaaggatagagcacatatcctgactgccttggcaataatagca
tataaacaggacaaagtggatgctgcaaagacactgctgtttaaatgttcattaaaggaa
cccaatatggaaagtctgaaggctttgtgcacactaggattggtaaagcaggatgcaaca
cttgcaacagccgccctaaaagaattactgaagcatgaaaaaggggatgatgggatttat
gagcggtgccttactgcatctgcagtttatgcattacaaggtagaaatgtgggcatccag
agagaagtctccaaagcagtgcacagtaacccagataatcctgccctctggtccctccta
tctcgagtagttccactgtctgcatcacaaaaggcaaaagggggagctgtagcaggaaat
gtcgcacatatacttgatgtaaagcacggaaaggaagtcctgctgaatattgcagttaat
cagttggcagcaggatgtcacatgctagaagatgagaaaaacaaccctataaaaaatgtc
cagagggccatccacatctgtccagataatcctgctgcctgggcagtgcttatggcagcc
tgtcatgctgaaaacactactgtctgtctaaacaacactcagccgaaacgaacaggtctg
gagatgacacttgtatctacagtttcagccaaaactggggaaagtaaccttcctcataat
tatgtccgtattctggaagactggtgtctctgtcaagctattaccagtctagaggagact
ggtaaactatcagaagctgaagctctttgtaacaaggctttaaaaagctgccctgagcac
ccaactctgtttttgcttttgagacaagttcagtgtaagcagctgttgaagtctcacaaa
gaacttccaggcaacatcctggaggagcttcgcaagacagtcatgaccagttcaacgtca
gttgcagcctggcaatggctggcaaaagtatatcagtctcagagaatgatgattggagcg
gagatgtgttacaggaagagtctgcagttggcgtcacagcagggcagctggaacgggaag
ttatccagtctgctcaggctagctatgctcgcgctggaaatctgcatggctaatgtctca
aatgatcactggccatccttggttcaggaggcaacaactgaagctttgaaactttctcct
tgccccctggcagctctgcttcaagccctgctacagtataatcacaaaatgggagcaagg
gagactcgacgaatgttggagagagtggtttatcaaccagggaatccagaaaccatagtg
tcggtggcacgctggtacctcctgcaacatctgtatgccaaagatgattgtgaattaata
gatgtgcttatagaaaatgccaaagctaatggggatgttagagctctggaactaaatgag
aagttgttagcaagcacctaa
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integrated database retrieval system
