Empidonax traillii (willow flycatcher): 114054840
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Entry
114054840 CDS
T05887
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04136
Autophagy - other
etl04140
Autophagy - animal
etl04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114054840 (ATG16L1)
04136 Autophagy - other
114054840 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
114054840 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
etl04131
]
114054840 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
etl03029
]
114054840 (ATG16L1)
Membrane trafficking [BR:
etl04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
114054840 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
114054840 (ATG16L1)
Mitochondrial biogenesis [BR:
etl03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
114054840 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG16
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_EIPR1
WD40_RFWD3
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_DCAF12
Beta-prop_HPS5
Beta-prop_NWD2_C
Beta-prop_WDR19_1st
CCDC93_CC
INO80F
HTH_6
WD40_like
Lipoprotein_6
FUSC
HEF_HK
V_ATPase_I
WH_CYT4
Fez1
Motif
Other DBs
NCBI-GeneID:
114054840
NCBI-ProteinID:
XP_027734168
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MASGLRAAGFPPWKRHIAAELRRRDRLQRQAFEEIIVQYNKLLEKSDLHAVLADKLQAEK
YDIQNRHEISCSPGHDGTWNDAQLQELAQLKIKHQEELTELHKKRGELAQSVIDLNNQMQ
QKDKEMQMNEAKIAEYLQKISDLETECQELRSKLQDLERANQTLKDEYDALQITFNALEE
KLRKTTEDNQELVSRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEPRD
DDIEVLADEASDTAEETSPVRAVSRVASKRLSQPAGGLLDSITNIFGLSESPLLGHQSSD
AARRRSLSSLPAPQDNTEPHPGASKEVRVPTTAICVFDAHDGEVNAVQFSPGSRLLATGG
MDRRVKLWEVLGDRCEPKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDNRLR
HTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQC
VMSGHFDKKIRFWDIRTESIVKELELLGRITALDLNSERTELLTCSRDDLLKIIDLRVSA
VKQTFSAQGFKCGSDWTRVVFSPDSNYVAAGSADGALYIWNVLTGKLERTLAKHHSSPIN
AVAWSPAGAHVVSVDKGNKAVLWAEF
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggcatcggggctgcgcgccgccgggttccccccatggaagcggcacatcgcggcggag
ctgcggcggcgggaccggctgcagcgccaggccttcgaggagatcatcgtccagtataac
aagctgctggagaagtcagaccttcatgcagtgctggctgataagcttcaagcagaaaaa
tatgacatacagaacagacatgagatcagctgcagcccaggacacgatggcacatggaat
gatgctcagctgcaggaactggcacagctgaagatcaagcaccaagaggagctcactgag
cttcacaagaaacgtggcgagctggcccagtctgtcattgatctgaacaaccaaatgcag
cagaaggacaaagagatgcagatgaacgaagccaagattgcagagtatttgcaaaagatt
tctgacctggaaacggagtgccaggaattgcgtagcaaactgcaagatcttgagcgagct
aatcagacactgaaagatgaatatgatgctctccagatcaccttcaatgccttggaggag
aaactaaggaaaactactgaagacaaccaggagctggtctcgcgttggatggcagagaaa
gcacaagaagccaatcgtttaaacgcagaaaatgaaaaggattcaaggagacgccaggcc
aggctgcagaaggagctggcggaagctgccaaggagcccctgcctgttgaacccagggat
gatgacatcgaagtgctggcggatgaagcctcggacacagcggaggaaacctctccggtg
cgagccgtcagccgcgtggccagtaagcgactctcccagccagctggaggccttctggac
tctatcactaatatctttggtctgtctgagtctccccttttgggacatcaatcttctgat
gctgccaggaggcgttctttatcctcgctccctgctccccaggataatacagagccacat
ccaggtgccagtaaggaagtgagagtgcccactactgccatctgtgtctttgatgcacat
gacggggaggtgaatgcggtgcagttcagccctggctcccggttacttgcaacaggaggc
atggaccgcagggtgaagctctgggaagtcttgggagataggtgtgagcccaaaggttcc
ctctctggtagtaatgctgggattacaagcatagaatttgatagtgctggttcttacctc
ttagcagcttcaaatgactttgccagcagaatctggacagttgatgacaatcgattgcgg
cacaccctgacgggtcacagcgggaaagtcctgtcagccaagttcttactggacaatgca
cgcattgtttcggggagccacgaccggaccctcaagctctgggacctccgcagcaaagtc
tgtataaaaacagtgtttgcaggatctagctgcaatgacatcgtgtgtactgagcagtgt
gtaatgagtggacattttgataagaaaatccgtttctgggacatcaggaccgaaagcata
gtaaaagagttggagctgcttggaagaatcacagctctggacctgaactcggagcgaaca
gagctgctgacctgttcccgtgatgatctgctcaagatcatcgacctgagggttagtgct
gtcaagcagacattcagtgcccagggattcaaatgtggctctgactggacgagagttgtg
ttcagccctgacagtaactatgtggctgctggttcagctgatggggccctctacatttgg
aatgtgcttactgggaagttggagaggacgcttgcaaagcatcacagttctcccatcaat
gcagtggcgtggtcgccagcgggtgcccacgtggtcagcgtggacaagggcaacaaggct
gtgctgtgggctgagttctga
DBGET
integrated database retrieval system
