Empidonax traillii (willow flycatcher): 114054950
Help
Entry
114054950 CDS
T05887
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55 isoform X1
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
etl03009
]
114054950 (DDX55)
Enzymes [BR:
etl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114054950 (DDX55)
Ribosome biogenesis [BR:
etl03009
]
Eukaryotic type
Pre-60S particles
Helicases
114054950 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
CTT_SPB4
SBF_like
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
114054950
NCBI-ProteinID:
XP_027734368
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MEAVTEGGWESLPVPLNPGVLRALRELRFHQMTPVQSATIPLFMSNKDVAAEAVTGSGKT
LAFVIPILEILLRREEKLKKMQVGAIIITPTRELAIQIHEVLSHFTKHFPMFSQILLIGG
RNPMEDVEKFKEHGGNIIVATPGRLEDLFRRKGDGLDLASCVKALDVLVLDEADRLLDMG
FEASLNAILDFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRITVKEKGVAATNTQKTPT
RLQNYYMICRADEKFNQLVHFLRQHRQEKHLVFFSTCACVEYYGKALESLIKQVKIMSIH
GKMKHKRNKIFTEFRKLPGGILVCTDVMARGIDIPEVHWVLQYDPPSSASAFVHRCGRTA
RIGHGGSALVFLLPMEESYVNFLSINQKCPMQEMKPQTNVLDLLPKLKSMALADRAVFEK
GMKAFVSHVQAYAKHECNLIFRMKDLDFASLARGFALLKMPKMPELRGKCFPDFTPVTVN
TDSISFKDKNREKQRQKKLEQQRKEREENEGKKKFIKNKAWSKQKAKREKKKKVTAKRKR
EEGSDIEDEDMEELLNDTRLLKRLKKGKISEEEFEKKVTGSQSRLKAETGADTDSEG
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggtgactgagggcggctgggaatccctgccggtgccactgaacccgggcgtg
ctgcgggcgctgcgggagctccgcttccaccagatgaccccagtgcagtccgcgaccatc
ccgctcttcatgagtaacaaagatgttgctgcggaggcggtgacgggcagtgggaaaacc
ttggcgtttgtgattcccatactggaaattctgctcagacgggaggaaaagttaaagaaa
atgcaggttggagccataattatcacgccaacgagggaactggccattcaaatccatgag
gtgctgtcacacttcacaaaacactttcccatgttcagtcagattcttctcattggtggc
aggaacccaatggaagatgttgaaaagtttaaggaacacggcgggaacatcatcgtggcc
accccggggcgcctggaggatttgttcaggagaaaaggggatgggctggatctcgcaagt
tgtgtgaaggctcttgatgtgttggtgttggatgaagcagacaggctcctggatatgggc
tttgaagccagtttaaatgccatcctggactttctgcccaagcagagaaggacaggcctg
ttctcagctactcagactcaggaggtggagaacctggtgagagcaggactccggaatccc
gtccggatcacggtgaaggagaagggagtggcagcaaccaacacccagaaaactcccacc
cgcctgcagaactattacatgatctgcagagcagatgaaaaatttaatcaattggtgcat
tttcttcggcagcacagacaggaaaaacacctggtcttttttagcacgtgtgcctgtgtg
gaatattatgggaaggctttggaatccttgattaaacaggtgaaaataatgagcattcac
gggaagatgaagcacaagcgtaacaagatctttacggaattccggaagctcccggggggc
attttggtttgcacagatgtgatggcccgtggcatcgacatcccagaagtgcactgggtt
ttgcagtacgacccacccagcagcgcaagcgccttcgtgcatcgctgcggtcgcaccgcg
cgcatcggccacggcggcagcgccctcgtgttcctgcttcccatggaggagtcctacgtt
aacttcctctccatcaaccaaaagtgtcccatgcaggaaatgaaaccacaaaccaacgtg
ttggatcttcttcccaaactgaagtccatggccctggctgacagggcagtgtttgagaaa
gggatgaaagcctttgtgtctcacgtgcaggcttatgccaaacacgaatgcaatctgatc
ttccgaatgaaagatctggatttcgccagtcttgccagaggttttgcattgttaaaaatg
ccaaagatgcctgaactaagaggaaaatgtttcccagactttactccagtcactgtgaat
acagactccatttcctttaaggacaaaaatagagaaaagcagagacaaaagaaattagaa
caacaaagaaaagagagagaagaaaatgaagggaaaaagaaattcataaagaacaaagcc
tggtcaaagcagaaagccaagagggagaagaaaaagaaagtaacagctaaaaggaagcgt
gaagagggctctgatatcgaagatgaggatatggaagagctgctgaatgacacaagactc
ttgaaaagactaaaaaaggggaagatcagtgaagaggagtttgagaagaaagtaacaggc
agccagagcaggctcaaagcagaaactggtgctgacacagattctgaaggctga
DBGET
integrated database retrieval system
