Empidonax traillii (willow flycatcher): 114055031
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Entry
114055031 CDS
T05887
Symbol
SKP2
Name
(RefSeq) S-phase kinase-associated protein 2
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04068
FoxO signaling pathway
etl04110
Cell cycle
etl04120
Ubiquitin mediated proteolysis
etl04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114055031 (SKP2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
114055031 (SKP2)
04150 mTOR signaling pathway
114055031 (SKP2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
114055031 (SKP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
etl04121
]
114055031 (SKP2)
Ubiquitin system [BR:
etl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
114055031 (SKP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
F-box-like
F-box
LRR_At5g56370
LRR_4
LRR_6
F-box_5
LRR_9
Motif
Other DBs
NCBI-GeneID:
114055031
NCBI-ProteinID:
XP_027734527
LinkDB
All DBs
Position
Unknown
AA seq
413 aa
AA seq
DB search
MYRKHLQEIPSSSTNVSTSLDWDSSKTSEFLSSVPLGVSVLKKEKLGNENTPQDLVSSGC
PAPKRQKEFVIVRRPWLLREAEPGVSLDALPDELLLAIFAYLPLKDLLKVSVICKRWHRL
SFDESLWQTLDLTGGNLLPGVLGQLLPAGVTVFRCPRACIGNPLFKTTELLKLQYLDFSN
CTVSVADLQSVLCLCERLQNLSLEGLVLSDNIIKSIARNPNLIRLNLCGCSGFSAEALEM
MLSSCSVLEELNLSWCDFTATHVKSAVSHITSQVNQLNLSGYRENLQIADVKTLVERCPF
LVHLDLSDSMMLKPECFQYFRQLMFLQHLCLSRCYQISPAALVELGEIQTLKTLQVFGIV
TDSSLQLLEEALPAVKINRSHFTTIARPTVGNKKNHEIWGIKCRLTLRNPSFL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgtacaggaaacacctccaggagatcccatcctccagcactaacgtttccaccagcttg
gactgggactccagcaagacctcggagttcctctcgagcgttcctctcggagtgtctgtc
cttaagaaagaaaagctgggcaatgaaaacacgccgcaagacctggtgtcatcaggctgt
cctgctccaaaacggcagaaggagtttgttattgtgcgccggccgtggctgctccgagag
gcagagccaggtgtttctctggatgcgcttccagatgaattacttttggccatctttgca
tatttgcccctaaaggacttgctaaaagtttcagtgatttgcaagagatggcatcgtctt
tcgtttgatgaatctctctggcagactcttgatcttactggtgggaacctgctgccagga
gtgcttggacaattgcttcctgcaggtgttactgtattccgctgcccaagagcctgtatt
gggaatccattgtttaaaacaactgaacttctcaaacttcagtacctggatttctcaaac
tgcacagtgtctgttgcagatctccagagtgttctttgtctctgtgaaagactgcagaac
ctcagcttggagggactagtgctttctgacaacatcatcaagagcattgctaggaatccc
aatttgatacgattaaatctttgtgggtgctcagggttctctgcagaagccttggagatg
atgttgagcagctgctctgtgctggaggagctgaacttgtcctggtgtgacttcacagcc
acacatgtcaaatcagcagtcagtcacattacttcacaagtcaaccaattaaatttaagt
ggatatagagagaatctacaaatagcagatgtgaaaacactggtggaaagatgtcctttt
cttgtccatttagatctcagcgacagcatgatgttaaagcctgagtgcttccagtatttt
cgacaactcatgttcctccaacatctttgtcttagtcggtgttatcagatatcacctgct
gccttggtagaacttggtgaaattcaaacgctgaagacgctgcaggtgtttgggatagtg
actgacagctccctgcagctcctcgaggaagcactgcctgcagtgaagatcaatcgttct
cactttacaaccattgcaaggcccactgttggcaacaaaaagaaccatgagatttgggga
atcaaatgcagattgacactgagaaatccgagtttcttatga
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