Empidonax traillii (willow flycatcher): 114055211
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Entry
114055211 CDS
T05887
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114055211 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etl03019
]
114055211 (NDC1)
Messenger RNA biogenesis [BR:
etl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114055211 (NDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
GP41
Motif
Other DBs
NCBI-GeneID:
114055211
NCBI-ProteinID:
XP_027734915
LinkDB
All DBs
Position
Unknown
AA seq
381 aa
AA seq
DB search
MWTYFTIFNLGGPSGDKAGGTPPSGRHGRAGHAGTCSPPIGRDGPCAPSHWPPPVRARRA
RGGSVAARHVGPLGGGFERAAGPGRAMEAAAGGQRALLRQVLGWRVAAAVTWSVVLLPVC
TAAFIVLSGLDPLHPVRWISNSFSDLYTSYVIFCIFLMSVVLIVISIFNVEFYAVVPSIP
CSRLALIGKIIHPQQVIHSFVHAVMGMLVAWCATVMTKGRFQFLAVSCTPSESLDDAVPQ
TCLNEYHLFFLLSGTFLGYSYSLFYLINNMNYLPFPIIQQYKYLRFRRSLPLLIKHSCVE
SLYFVRNFFVAYYFFGYIPKVWICTTMDLHTDSKLHPLDTLSGLLDVSLFYHTWLCGVFL
LMTWYIAWLLFKIYATEEISL
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgtggacttattttaccattttcaacctgggaggaccctcaggagacaaggcgggggga
acacccccctcaggccgccatggccgcgcggggcacgccgggacttgtagtccacccatc
ggacgtgacgggccgtgcgcgccctcccattggccgccgccggtgcgcgcgaggcgggcg
cgcggcggaagtgtcgcagcccggcacgtggggccgttgggcggcggctttgaacgggcg
gcggggccgggccgggccatggaggcggcggcgggcgggcagcgggcgctgctgcggcag
gtgctgggctggcgagtggccgccgccgtcacctggtccgtggtgctgctgcccgtgtgc
accgcggccttcatcgtcctcagcggcctcgacccgctgcaccccgtgcgctggatctcg
aattctttcagtgatttgtatacttcctatgtcatcttttgtatcttcctcatgtctgtg
gtgctaattgtaataagcatcttcaacgttgaattttatgcagttgtgccatcaatacca
tgctctcgattagcactgataggaaaaattattcaccctcagcaagtcatccattctttt
gttcatgctgtgatgggaatgctggtggcttggtgtgctacagttatgacaaaaggcagg
ttccagtttcttgctgtgtcctgcacgccttcagaaagcctagatgatgctgttcctcag
acgtgcctaaacgagtatcacctcttctttctactttctggaactttcttgggatacagt
tatagccttttctatcttatcaacaatatgaattatttgccatttccaatcatacagcaa
tacaagtatctacgtttcagaagatctttgcctctcctgatcaaacacagttgtgtggaa
tcattatattttgttagaaacttctttgttgcatattacttttttggttatatcccaaag
gtttggatatgtacgacgatggatcttcatacagacagtaaattgcatcctcttgacact
ctgagtggcttattggatgtctccttgttttaccatacctggttgtgtggtgtgtttctt
ctgatgacctggtacattgcatggttgctcttcaaaatctatgctacagaggaaatctca
ttgtag
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