KEGG   Empidonax traillii (willow flycatcher): 114055226
Entry
114055226         CDS       T05887                                 
Symbol
EXOSC5
Name
(RefSeq) exosome complex component RRP46
  KO
K12590  exosome complex component RRP46
Organism
etl  Empidonax traillii (willow flycatcher)
Pathway
etl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:etl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    114055226 (EXOSC5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:etl03019]
    114055226 (EXOSC5)
Messenger RNA biogenesis [BR:etl03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     114055226 (EXOSC5)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 114055226
NCBI-ProteinID: XP_027734942
LinkDB
Position
Unknown
AA seq 220 aa
MAAMAEPGGQCRLRPFSCEQGLLSRPDGSAAFLQGDTSVLAGLYGPAEAKLSKELPDRAA
LEVLLRPKVGLPGVLERSREQQLRQTCEAVVLGVLHPRTAVTLVLQVLSDAGSLLSCCLN
AACMGLLDAGLPLSSLFCGVTCALSPDGTVTLDPTARQEQEARAVLTFAIDSSEKKVLMV
TTKGSCSVEEMQQCLVMAQRAADTIFQFYRDSLHRRYSKS
NT seq 663 nt   +upstreamnt  +downstreamnt
atggcggcgatggcggagcccggcgggcagtgccgcctgcggcccttctcctgcgagcag
gggctgctctcgcggcccgacggctcggccgccttcctgcagggtgacacctcggtcctg
gccgggctctacggccccgcagaagcgaagctcagcaaggagctgccggaccgggcggcg
ctggaggtgctgctgcgccccaaggtggggctgccaggggtgctggagcgcagccgggag
cagcagctgcgccagacgtgcgaggctgtggtgctgggagtgctgcacccgcgcacggcc
gtcacgctggtgctgcaggtgctcagcgacgccgggtcgctgctgtcgtgctgcctgaac
gccgcctgcatggggctgctggacgcagggctgcccctctcctccctcttctgtggtgtc
acctgtgccctcagccctgatggcaccgtcaccctcgaccccacagcgcggcaggagcag
gaggcccgcgccgtgctcaccttcgccatcgacagcagcgagaagaaggtgctgatggtc
accaccaagggcagctgctccgtggaggagatgcagcagtgcctggtcatggcccagcgt
gctgcagacaccatcttccagttctaccgcgattccctgcaccgccggtactccaaatcc
tga

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