Empidonax traillii (willow flycatcher): 114055226
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Entry
114055226 CDS
T05887
Symbol
EXOSC5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114055226 (EXOSC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etl03019
]
114055226 (EXOSC5)
Messenger RNA biogenesis [BR:
etl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
114055226 (EXOSC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
114055226
NCBI-ProteinID:
XP_027734942
LinkDB
All DBs
Position
Unknown
AA seq
220 aa
AA seq
DB search
MAAMAEPGGQCRLRPFSCEQGLLSRPDGSAAFLQGDTSVLAGLYGPAEAKLSKELPDRAA
LEVLLRPKVGLPGVLERSREQQLRQTCEAVVLGVLHPRTAVTLVLQVLSDAGSLLSCCLN
AACMGLLDAGLPLSSLFCGVTCALSPDGTVTLDPTARQEQEARAVLTFAIDSSEKKVLMV
TTKGSCSVEEMQQCLVMAQRAADTIFQFYRDSLHRRYSKS
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgatggcggagcccggcgggcagtgccgcctgcggcccttctcctgcgagcag
gggctgctctcgcggcccgacggctcggccgccttcctgcagggtgacacctcggtcctg
gccgggctctacggccccgcagaagcgaagctcagcaaggagctgccggaccgggcggcg
ctggaggtgctgctgcgccccaaggtggggctgccaggggtgctggagcgcagccgggag
cagcagctgcgccagacgtgcgaggctgtggtgctgggagtgctgcacccgcgcacggcc
gtcacgctggtgctgcaggtgctcagcgacgccgggtcgctgctgtcgtgctgcctgaac
gccgcctgcatggggctgctggacgcagggctgcccctctcctccctcttctgtggtgtc
acctgtgccctcagccctgatggcaccgtcaccctcgaccccacagcgcggcaggagcag
gaggcccgcgccgtgctcaccttcgccatcgacagcagcgagaagaaggtgctgatggtc
accaccaagggcagctgctccgtggaggagatgcagcagtgcctggtcatggcccagcgt
gctgcagacaccatcttccagttctaccgcgattccctgcaccgccggtactccaaatcc
tga
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